Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 HYMAI-201ENST00000635591 3347 ntBASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 AC138035.3-201ENST00000622706 2791 ntBASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 AL357563.1-201ENST00000404728 395 ntBASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 AL354861.1-201ENST00000445213 355 ntBASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 RN7SL530P-201ENST00000485097 298 ntBASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 AP003398.1-201ENST00000531124 318 ntBASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 AC132872.4-202ENST00000622924 2756 ntBASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTFDC1Q9BY42 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTFDC1Q9BY42 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTFDC1Q9BY42 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.83■□□□□ 0.45
RTFDC1Q9BY42 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.83■□□□□ 0.45
RTFDC1Q9BY42 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RTFDC1Q9BY42 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.83■□□□□ 0.45
RTFDC1Q9BY42 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RTFDC1Q9BY42 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
RTFDC1Q9BY42 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC17.83■□□□□ 0.45
RTFDC1Q9BY42 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
RTFDC1Q9BY42 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTFDC1Q9BY42 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTFDC1Q9BY42 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 BAK1P1-201ENST00000317045 636 ntBASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 AC092638.2-201ENST00000441105 947 ntBASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 ST13P19-201ENST00000442505 1124 ntBASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 MT3-203ENST00000565838 421 ntTSL 3 BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 IL9RP3-201ENST00000442856 1674 ntBASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTFDC1Q9BY42 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 LINC01101-201ENST00000622953 1884 ntBASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC17.82■□□□□ 0.44
RTFDC1Q9BY42 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms