Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 PIN1P1-201ENST00000412108 996 ntBASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 ACTG1P3-201ENST00000431775 1114 ntBASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 AL162726.2-201ENST00000438986 1017 ntBASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 AC106760.1-201ENST00000508690 800 ntBASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 AC140912.1-201ENST00000577171 1054 ntBASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 MIR5189-201ENST00000577370 114 ntBASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 AC079781.5-202ENST00000641784 3743 ntBASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RSPO3Q9BXY4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
RSPO3Q9BXY4 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
RSPO3Q9BXY4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
RSPO3Q9BXY4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 AC023794.5-201ENST00000564380 2157 ntBASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 BAATP1-201ENST00000412284 1225 ntBASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 AC245100.3-201ENST00000441281 285 ntBASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 TMEM198B-204ENST00000484016 896 ntBASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms