Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.69□□□□□ -0.54
TRGV9Q99603 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.69□□□□□ -0.54
TRGV9Q99603 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
TRGV9Q99603 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 AC016397.2-201ENST00000624848 1985 ntBASIC11.68□□□□□ -0.54
TRGV9Q99603 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV9Q99603 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.68□□□□□ -0.54
TRGV9Q99603 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
TRGV9Q99603 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC11.68□□□□□ -0.54
TRGV9Q99603 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.68□□□□□ -0.54
TRGV9Q99603 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV9Q99603 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
TRGV9Q99603 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.68□□□□□ -0.54
TRGV9Q99603 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV9Q99603 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV9Q99603 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
TRGV9Q99603 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
TRGV9Q99603 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
TRGV9Q99603 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 RPS15-201ENST00000233609 534 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV9Q99603 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV9Q99603 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.68□□□□□ -0.54
TRGV9Q99603 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV9Q99603 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.68□□□□□ -0.54
TRGV9Q99603 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV9Q99603 MEP1AP4-201ENST00000423244 1087 ntBASIC11.68□□□□□ -0.54
TRGV9Q99603 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV9Q99603 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 SPDYE18-201ENST00000510091 1050 ntBASIC11.68□□□□□ -0.54
TRGV9Q99603 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC11.68□□□□□ -0.54
TRGV9Q99603 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
TRGV9Q99603 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV9Q99603 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC11.68□□□□□ -0.54
TRGV9Q99603 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC11.68□□□□□ -0.54
TRGV9Q99603 RRP7BP-205ENST00000566851 833 ntBASIC11.68□□□□□ -0.54
TRGV9Q99603 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV9Q99603 RPS15-205ENST00000586686 562 ntTSL 5 BASIC11.68□□□□□ -0.54
TRGV9Q99603 RPS15-208ENST00000591804 711 ntTSL 5 BASIC11.68□□□□□ -0.54
TRGV9Q99603 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC11.68□□□□□ -0.54
TRGV9Q99603 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC11.68□□□□□ -0.54
TRGV9Q99603 AC007431.3-201ENST00000623221 587 ntBASIC11.68□□□□□ -0.54
TRGV9Q99603 HFE2-206ENST00000634927 506 ntTSL 4 BASIC11.68□□□□□ -0.54
TRGV9Q99603 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV9Q99603 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.68□□□□□ -0.54
TRGV9Q99603 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
TRGV9Q99603 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
TRGV9Q99603 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV9Q99603 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
TRGV9Q99603 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 MBLAC2-202ENST00000514906 1936 ntBASIC11.68□□□□□ -0.54
TRGV9Q99603 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.68□□□□□ -0.54
TRGV9Q99603 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
TRGV9Q99603 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV9Q99603 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV9Q99603 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
TRGV9Q99603 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
TRGV9Q99603 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 AC010327.5-201ENST00000586923 3061 ntBASIC11.67□□□□□ -0.54
TRGV9Q99603 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms