Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 AC125604.1-201ENST00000496255 707 ntBASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 MARK2P5-201ENST00000507649 634 ntBASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 AL133499.1-201ENST00000596207 608 ntBASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC85AQ96PX6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC85AQ96PX6 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
CCDC85AQ96PX6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC85AQ96PX6 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 TSPY26P-202ENST00000565928 3884 ntBASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 MSRA-203ENST00000441698 788 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 RN7SL769P-201ENST00000469386 295 ntBASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 AC134698.3-201ENST00000523880 214 ntBASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 Z98259.2-201ENST00000641583 609 ntBASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 LINC00528-201ENST00000600723 2160 ntBASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCDC85AQ96PX6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 AL157791.1-201ENST00000553667 1699 ntBASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 HLA-J-204ENST00000495278 958 ntBASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 MIR6720-201ENST00000611664 98 ntBASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC85AQ96PX6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms