Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 AL512791.2-201ENST00000615251 4609 ntBASIC11.4□□□□□ -0.58
AP1S3Q96PC3 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 PHKG1P2-201ENST00000457537 863 ntBASIC11.4□□□□□ -0.58
AP1S3Q96PC3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
AP1S3Q96PC3 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
AP1S3Q96PC3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
AP1S3Q96PC3 SMAD9-201ENST00000350148 5447 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
AP1S3Q96PC3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
AP1S3Q96PC3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.4□□□□□ -0.59
AP1S3Q96PC3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
AP1S3Q96PC3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
AP1S3Q96PC3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.4□□□□□ -0.59
AP1S3Q96PC3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
AP1S3Q96PC3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11.4□□□□□ -0.59
AP1S3Q96PC3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 COL8A1-201ENST00000261037 5705 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 PPT1-213ENST00000641319 2388 ntBASIC11.39□□□□□ -0.59
AP1S3Q96PC3 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 AL031284.1-201ENST00000419297 478 ntBASIC11.39□□□□□ -0.59
AP1S3Q96PC3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 EMBP1-201ENST00000458200 901 ntBASIC11.39□□□□□ -0.59
AP1S3Q96PC3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 AC079776.4-201ENST00000511039 504 ntBASIC11.39□□□□□ -0.59
AP1S3Q96PC3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 KRT19P2-202ENST00000557173 1012 ntBASIC11.39□□□□□ -0.59
AP1S3Q96PC3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 CYP4F24P-201ENST00000586049 1580 ntBASIC11.39□□□□□ -0.59
AP1S3Q96PC3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms