Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RPL7P3-201ENST00000441388 714 ntBASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 KRT18P25-201ENST00000508931 1278 ntBASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 ECM1P1-201ENST00000604092 1279 ntBASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 AP005019.2-201ENST00000615104 511 ntBASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 AC009542.2-202ENST00000619004 1067 ntBASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP4CQ96CF2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 AL122018.1-201ENST00000446607 2310 ntBASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 KCP-203ENST00000610776 5108 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 AC078819.1-201ENST00000547454 765 ntBASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 AC012085.1-201ENST00000548270 765 ntBASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 AL603764.1-201ENST00000636452 321 ntBASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 LRRC59-203ENST00000576448 1531 ntBASIC17.88■□□□□ 0.45
CHMP4CQ96CF2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 C2orf27AP3-201ENST00000434123 579 ntBASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 KRT90P-201ENST00000549264 1064 ntBASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 AL354718.3-201ENST00000616414 581 ntBASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 CR382287.1-201ENST00000623954 586 ntBASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP4CQ96CF2 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms