Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNED1Q8TER0 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNED1Q8TER0 CELP-201ENST00000411440 1249 ntTSL 5 BASIC17.78■□□□□ 0.44
SNED1Q8TER0 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC17.78■□□□□ 0.44
SNED1Q8TER0 OR8T1P-201ENST00000421347 918 ntBASIC17.78■□□□□ 0.44
SNED1Q8TER0 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
SNED1Q8TER0 AP003398.1-201ENST00000531124 318 ntBASIC17.78■□□□□ 0.44
SNED1Q8TER0 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.78■□□□□ 0.44
SNED1Q8TER0 AC124068.2-201ENST00000569473 1109 ntBASIC17.78■□□□□ 0.44
SNED1Q8TER0 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC17.78■□□□□ 0.44
SNED1Q8TER0 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.78■□□□□ 0.44
SNED1Q8TER0 KHSRPP1-201ENST00000427983 1768 ntBASIC17.78■□□□□ 0.44
SNED1Q8TER0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNED1Q8TER0 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNED1Q8TER0 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNED1Q8TER0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNED1Q8TER0 AC013268.4-201ENST00000637413 2228 ntBASIC17.78■□□□□ 0.44
SNED1Q8TER0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNED1Q8TER0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNED1Q8TER0 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SNED1Q8TER0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SNED1Q8TER0 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNED1Q8TER0 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNED1Q8TER0 AC139712.1-201ENST00000378256 1875 ntBASIC17.77■□□□□ 0.44
SNED1Q8TER0 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SNED1Q8TER0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNED1Q8TER0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SNED1Q8TER0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNED1Q8TER0 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNED1Q8TER0 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNED1Q8TER0 AQP7P5-201ENST00000428759 1049 ntBASIC17.77■□□□□ 0.44
SNED1Q8TER0 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.77■□□□□ 0.44
SNED1Q8TER0 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC17.77■□□□□ 0.44
SNED1Q8TER0 AQP7P4-201ENST00000447083 1042 ntBASIC17.77■□□□□ 0.44
SNED1Q8TER0 AQP7P2-201ENST00000453967 1041 ntBASIC17.77■□□□□ 0.44
SNED1Q8TER0 AC024293.1-201ENST00000467930 498 ntBASIC17.77■□□□□ 0.44
SNED1Q8TER0 AC138701.2-201ENST00000553634 226 ntBASIC17.77■□□□□ 0.44
SNED1Q8TER0 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC17.77■□□□□ 0.44
SNED1Q8TER0 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNED1Q8TER0 AQP7P3-201ENST00000624547 1041 ntBASIC17.77■□□□□ 0.44
SNED1Q8TER0 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNED1Q8TER0 AC090340.1-201ENST00000620778 4980 ntBASIC17.77■□□□□ 0.43
SNED1Q8TER0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.77■□□□□ 0.43
SNED1Q8TER0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SNED1Q8TER0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNED1Q8TER0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNED1Q8TER0 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SNED1Q8TER0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNED1Q8TER0 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNED1Q8TER0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.76■□□□□ 0.43
SNED1Q8TER0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNED1Q8TER0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNED1Q8TER0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNED1Q8TER0 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNED1Q8TER0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNED1Q8TER0 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC17.76■□□□□ 0.43
SNED1Q8TER0 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC17.76■□□□□ 0.43
SNED1Q8TER0 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.76■□□□□ 0.43
SNED1Q8TER0 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC17.76■□□□□ 0.43
SNED1Q8TER0 ERP29P1-201ENST00000442902 706 ntBASIC17.76■□□□□ 0.43
SNED1Q8TER0 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNED1Q8TER0 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNED1Q8TER0 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.76■□□□□ 0.43
SNED1Q8TER0 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC17.76■□□□□ 0.43
SNED1Q8TER0 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC17.76■□□□□ 0.43
SNED1Q8TER0 HKR1-225ENST00000592168 566 ntTSL 4 BASIC17.76■□□□□ 0.43
SNED1Q8TER0 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC17.76■□□□□ 0.43
SNED1Q8TER0 AC140113.1-201ENST00000603467 169 ntBASIC17.76■□□□□ 0.43
SNED1Q8TER0 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNED1Q8TER0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.76■□□□□ 0.43
SNED1Q8TER0 AL162727.3-201ENST00000635661 2787 ntBASIC17.76■□□□□ 0.43
SNED1Q8TER0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNED1Q8TER0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNED1Q8TER0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.76■□□□□ 0.43
SNED1Q8TER0 AL109954.1-202ENST00000564051 2148 ntBASIC17.76■□□□□ 0.43
SNED1Q8TER0 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SNED1Q8TER0 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SNED1Q8TER0 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNED1Q8TER0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNED1Q8TER0 AC025183.3-201ENST00000623526 1482 ntBASIC17.76■□□□□ 0.43
SNED1Q8TER0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SNED1Q8TER0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNED1Q8TER0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNED1Q8TER0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNED1Q8TER0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.76■□□□□ 0.43
SNED1Q8TER0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNED1Q8TER0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.76■□□□□ 0.43
SNED1Q8TER0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNED1Q8TER0 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNED1Q8TER0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.75■□□□□ 0.43
SNED1Q8TER0 API5-208ENST00000531273 1868 ntTSL 2 BASIC17.75■□□□□ 0.43
SNED1Q8TER0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNED1Q8TER0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNED1Q8TER0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SNED1Q8TER0 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNED1Q8TER0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.75■□□□□ 0.43
SNED1Q8TER0 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNED1Q8TER0 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC17.75■□□□□ 0.43
SNED1Q8TER0 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC17.75■□□□□ 0.43
SNED1Q8TER0 RN7SKP109-201ENST00000410592 316 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms