Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHKBP1Q8TBC3 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
SHKBP1Q8TBC3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.67■□□□□ 0.1
SHKBP1Q8TBC3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHKBP1Q8TBC3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHKBP1Q8TBC3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHKBP1Q8TBC3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHKBP1Q8TBC3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHKBP1Q8TBC3 AC011840.2-201ENST00000563063 1520 ntBASIC15.67■□□□□ 0.1
SHKBP1Q8TBC3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHKBP1Q8TBC3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.67■□□□□ 0.1
SHKBP1Q8TBC3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHKBP1Q8TBC3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHKBP1Q8TBC3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHKBP1Q8TBC3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHKBP1Q8TBC3 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHKBP1Q8TBC3 TUBBP5-203ENST00000508529 1334 ntBASIC15.67■□□□□ 0.1
SHKBP1Q8TBC3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.67■□□□□ 0.1
SHKBP1Q8TBC3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHKBP1Q8TBC3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 UPF3AP2-201ENST00000457924 1132 ntBASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 AC022217.1-201ENST00000521069 738 ntBASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 BNIP3P13-201ENST00000599968 566 ntBASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 AL645939.5-201ENST00000606834 243 ntBASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 AL162426.1-201ENST00000624141 743 ntBASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHKBP1Q8TBC3 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 AC020910.5-201ENST00000623668 1865 ntBASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 MIR769-201ENST00000390225 118 ntBASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 AC009955.4-201ENST00000597192 544 ntBASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 AC097724.1-201ENST00000609581 426 ntBASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 AC005089.1-201ENST00000619486 2241 ntBASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms