Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13□□□□□ -0.33
BEST4Q8NFU0 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13□□□□□ -0.33
BEST4Q8NFU0 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13□□□□□ -0.33
BEST4Q8NFU0 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
BEST4Q8NFU0 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BEST4Q8NFU0 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 AC004241.5-201ENST00000623870 2448 ntBASIC12.99□□□□□ -0.33
BEST4Q8NFU0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 AL365181.3-201ENST00000605886 3222 ntBASIC12.99□□□□□ -0.33
BEST4Q8NFU0 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 AL353705.2-201ENST00000428243 662 ntBASIC12.99□□□□□ -0.33
BEST4Q8NFU0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.99□□□□□ -0.33
BEST4Q8NFU0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 REXO1L4P-201ENST00000605109 1937 ntBASIC12.98□□□□□ -0.33
BEST4Q8NFU0 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 CICP16-201ENST00000502609 2813 ntBASIC12.98□□□□□ -0.33
BEST4Q8NFU0 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 AL450487.1-201ENST00000426799 995 ntBASIC12.98□□□□□ -0.33
BEST4Q8NFU0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 KRT8P48-201ENST00000515599 1220 ntBASIC12.98□□□□□ -0.33
BEST4Q8NFU0 SLC25A39P2-201ENST00000537614 270 ntBASIC12.98□□□□□ -0.33
BEST4Q8NFU0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.98□□□□□ -0.33
BEST4Q8NFU0 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
BEST4Q8NFU0 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms