Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.06■□□□□ 0.16
COLGALT1Q8NBJ5 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
COLGALT1Q8NBJ5 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COLGALT1Q8NBJ5 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.06■□□□□ 0.16
COLGALT1Q8NBJ5 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
COLGALT1Q8NBJ5 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
COLGALT1Q8NBJ5 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.06■□□□□ 0.16
COLGALT1Q8NBJ5 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COLGALT1Q8NBJ5 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COLGALT1Q8NBJ5 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COLGALT1Q8NBJ5 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COLGALT1Q8NBJ5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COLGALT1Q8NBJ5 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COLGALT1Q8NBJ5 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COLGALT1Q8NBJ5 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.06■□□□□ 0.16
COLGALT1Q8NBJ5 REXO1L4P-201ENST00000605109 1937 ntBASIC16.06■□□□□ 0.16
COLGALT1Q8NBJ5 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 AC020910.5-201ENST00000623668 1865 ntBASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 MIR5572-201ENST00000583188 137 ntBASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
COLGALT1Q8NBJ5 PKD1P5-201ENST00000532415 10291 ntBASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 TNRC18P2-201ENST00000417666 2714 ntBASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 AC091951.1-201ENST00000512854 2465 ntBASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 RN7SKP230-201ENST00000365642 335 ntBASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 FAM58BP-201ENST00000439056 645 ntBASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 AC006335.1-201ENST00000445200 547 ntBASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 AC234782.1-201ENST00000451950 919 ntBASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 SNORD3B-2-202ENST00000571722 791 ntBASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 AC020922.3-201ENST00000595064 547 ntBASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 AL353770.1-201ENST00000614915 403 ntBASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms