Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KDM1BQ8NB78 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KDM1BQ8NB78 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.25■□□□□ 0.03
KDM1BQ8NB78 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.25■□□□□ 0.03
KDM1BQ8NB78 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
KDM1BQ8NB78 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KDM1BQ8NB78 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
KDM1BQ8NB78 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KDM1BQ8NB78 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.25■□□□□ 0.03
KDM1BQ8NB78 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
KDM1BQ8NB78 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KDM1BQ8NB78 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KDM1BQ8NB78 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KDM1BQ8NB78 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 AL133338.1-201ENST00000565695 1517 ntBASIC15.24■□□□□ 0.03
KDM1BQ8NB78 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 AC243960.2-201ENST00000600996 747 ntBASIC15.24■□□□□ 0.03
KDM1BQ8NB78 AC244093.1-201ENST00000610837 814 ntBASIC15.24■□□□□ 0.03
KDM1BQ8NB78 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 KRT8P4-201ENST00000509735 1454 ntBASIC15.24■□□□□ 0.03
KDM1BQ8NB78 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM1BQ8NB78 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 AL138725.1-201ENST00000407347 1314 ntBASIC15.23■□□□□ 0.03
KDM1BQ8NB78 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.23■□□□□ 0.03
KDM1BQ8NB78 AL354877.1-201ENST00000424412 413 ntBASIC15.23■□□□□ 0.03
KDM1BQ8NB78 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 HIST2H2BB-201ENST00000449108 381 ntBASIC15.23■□□□□ 0.03
KDM1BQ8NB78 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 AC091804.1-201ENST00000486888 567 ntBASIC15.23■□□□□ 0.03
KDM1BQ8NB78 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.23■□□□□ 0.03
KDM1BQ8NB78 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms