Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 RNA5SP423-201ENST00000517127 109 ntBASIC15.21■□□□□ 0.03
CHPFQ8IZ52 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 AL358472.3-201ENST00000608147 415 ntBASIC15.21■□□□□ 0.03
CHPFQ8IZ52 AC091544.8-201ENST00000619490 361 ntBASIC15.21■□□□□ 0.03
CHPFQ8IZ52 AC138627.1-207ENST00000641560 1006 ntBASIC15.21■□□□□ 0.03
CHPFQ8IZ52 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHPFQ8IZ52 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.21■□□□□ 0.02
CHPFQ8IZ52 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CHPFQ8IZ52 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.21■□□□□ 0.02
CHPFQ8IZ52 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHPFQ8IZ52 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHPFQ8IZ52 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHPFQ8IZ52 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.21■□□□□ 0.02
CHPFQ8IZ52 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.21■□□□□ 0.02
CHPFQ8IZ52 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CHPFQ8IZ52 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.21■□□□□ 0.02
CHPFQ8IZ52 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 AC092506.1-202ENST00000401022 528 ntBASIC15.2■□□□□ 0.02
CHPFQ8IZ52 AL008707.1-201ENST00000422498 534 ntBASIC15.2■□□□□ 0.02
CHPFQ8IZ52 AC011742.3-201ENST00000439053 820 ntBASIC15.2■□□□□ 0.02
CHPFQ8IZ52 Z97180.1-201ENST00000445173 988 ntBASIC15.2■□□□□ 0.02
CHPFQ8IZ52 UPF3AP2-201ENST00000457924 1132 ntBASIC15.2■□□□□ 0.02
CHPFQ8IZ52 TUBB8P8-201ENST00000458717 1058 ntBASIC15.2■□□□□ 0.02
CHPFQ8IZ52 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 AC100827.2-201ENST00000563214 1194 ntBASIC15.2■□□□□ 0.02
CHPFQ8IZ52 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 RN7SL163P-201ENST00000583100 276 ntBASIC15.2■□□□□ 0.02
CHPFQ8IZ52 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 AC138696.2-201ENST00000607376 223 ntBASIC15.2■□□□□ 0.02
CHPFQ8IZ52 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 CU633904.3-201ENST00000624042 1029 ntBASIC15.2■□□□□ 0.02
CHPFQ8IZ52 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 AC011840.2-201ENST00000563063 1520 ntBASIC15.2■□□□□ 0.02
CHPFQ8IZ52 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 AC009093.2-202ENST00000620513 2079 ntBASIC15.2■□□□□ 0.02
CHPFQ8IZ52 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHPFQ8IZ52 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHPFQ8IZ52 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHPFQ8IZ52 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms