Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC106820.3-201ENST00000561653 397 ntBASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 AP005482.1-201ENST00000563722 1273 ntBASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 MIR4259-201ENST00000584466 101 ntBASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 OR10B1P-201ENST00000601666 907 ntBASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 AC138696.2-201ENST00000607376 223 ntBASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SCUBE3Q8IX30 AL354989.2-201ENST00000435838 1540 ntBASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 AHCYP2-201ENST00000430630 1300 ntBASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 AC015656.1-201ENST00000624209 3578 ntBASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 TLE1P1-201ENST00000422965 589 ntBASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 AP003171.2-201ENST00000528208 925 ntBASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 LINC00552-201ENST00000625151 2579 ntBASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SCUBE3Q8IX30 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 AC009093.2-202ENST00000620513 2079 ntBASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms