Protein–RNA interactions for Protein: Q8IX21

SLF2, SMC5-SMC6 complex localization factor protein 2, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2Q8IX21 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLF2Q8IX21 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLF2Q8IX21 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLF2Q8IX21 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.7■□□□□ 0.42
SLF2Q8IX21 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.7■□□□□ 0.42
SLF2Q8IX21 AC007274.2-201ENST00000421675 662 ntBASIC17.7■□□□□ 0.42
SLF2Q8IX21 AL596276.2-201ENST00000447525 331 ntBASIC17.7■□□□□ 0.42
SLF2Q8IX21 AC006122.1-201ENST00000493323 440 ntBASIC17.7■□□□□ 0.42
SLF2Q8IX21 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
SLF2Q8IX21 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.7■□□□□ 0.42
SLF2Q8IX21 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.7■□□□□ 0.42
SLF2Q8IX21 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.7■□□□□ 0.42
SLF2Q8IX21 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLF2Q8IX21 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLF2Q8IX21 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLF2Q8IX21 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.7■□□□□ 0.42
SLF2Q8IX21 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLF2Q8IX21 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
SLF2Q8IX21 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLF2Q8IX21 AC136759.1-202ENST00000530858 2194 ntBASIC17.7■□□□□ 0.42
SLF2Q8IX21 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLF2Q8IX21 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SLF2Q8IX21 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLF2Q8IX21 AC046158.3-201ENST00000624947 2558 ntBASIC17.7■□□□□ 0.42
SLF2Q8IX21 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.7■□□□□ 0.42
SLF2Q8IX21 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SLF2Q8IX21 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLF2Q8IX21 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.7■□□□□ 0.42
SLF2Q8IX21 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLF2Q8IX21 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLF2Q8IX21 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLF2Q8IX21 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLF2Q8IX21 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLF2Q8IX21 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLF2Q8IX21 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLF2Q8IX21 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLF2Q8IX21 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLF2Q8IX21 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLF2Q8IX21 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLF2Q8IX21 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.69■□□□□ 0.42
SLF2Q8IX21 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 POU5F1P2-201ENST00000521750 823 ntBASIC17.69■□□□□ 0.42
SLF2Q8IX21 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 FGFR3P5-201ENST00000564496 886 ntBASIC17.69■□□□□ 0.42
SLF2Q8IX21 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 RN7SL574P-201ENST00000581512 297 ntBASIC17.69■□□□□ 0.42
SLF2Q8IX21 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLF2Q8IX21 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 AC009093.10-201ENST00000641956 1442 ntBASIC17.69■□□□□ 0.42
SLF2Q8IX21 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLF2Q8IX21 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLF2Q8IX21 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLF2Q8IX21 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.69■□□□□ 0.42
SLF2Q8IX21 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLF2Q8IX21 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLF2Q8IX21 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
SLF2Q8IX21 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLF2Q8IX21 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.68■□□□□ 0.42
SLF2Q8IX21 AC105917.1-201ENST00000506637 2539 ntBASIC17.68■□□□□ 0.42
SLF2Q8IX21 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SLF2Q8IX21 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SLF2Q8IX21 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLF2Q8IX21 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.68■□□□□ 0.42
SLF2Q8IX21 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLF2Q8IX21 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLF2Q8IX21 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SLF2Q8IX21 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.68■□□□□ 0.42
SLF2Q8IX21 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SLF2Q8IX21 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLF2Q8IX21 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLF2Q8IX21 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.68■□□□□ 0.42
SLF2Q8IX21 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLF2Q8IX21 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.68■□□□□ 0.42
SLF2Q8IX21 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.68■□□□□ 0.42
SLF2Q8IX21 ISCA2P1-201ENST00000425548 448 ntBASIC17.68■□□□□ 0.42
SLF2Q8IX21 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.68■□□□□ 0.42
SLF2Q8IX21 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.68■□□□□ 0.42
SLF2Q8IX21 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.68■□□□□ 0.42
SLF2Q8IX21 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms