Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 RN7SL163P-201ENST00000583100 276 ntBASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 AC005962.1-201ENST00000584100 773 ntBASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 AL645939.5-201ENST00000606834 243 ntBASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 AC092135.3-201ENST00000624151 1846 ntBASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC60Q8IWA6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 AL157407.1-201ENST00000435784 904 ntBASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 FAM58BP-201ENST00000439056 645 ntBASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 AL645933.1-201ENST00000440087 609 ntBASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 AC012441.2-201ENST00000444843 739 ntBASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 NDUFV2P1-201ENST00000596415 907 ntBASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 AL606495.2-201ENST00000605867 535 ntBASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 AC090164.2-201ENST00000611487 516 ntBASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC60Q8IWA6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 IGHJ2P-201ENST00000454480 60 ntBASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC60Q8IWA6 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms