Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 AC063926.2-201ENST00000623766 1308 ntBASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 LINC01230-201ENST00000625222 3017 ntBASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 RN7SKP230-201ENST00000365642 335 ntBASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 C2orf27AP3-201ENST00000434123 579 ntBASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 AC016694.1-201ENST00000434179 700 ntBASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 RAB43P1-201ENST00000561790 589 ntBASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 AL354718.3-201ENST00000616414 581 ntBASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 AC138951.2-201ENST00000623455 1161 ntBASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 CR382287.1-201ENST00000623954 586 ntBASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB11FIP4Q86YS3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 SALL4P5-201ENST00000419001 1760 ntBASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 TPM3P8-201ENST00000330554 643 ntBASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 CTBP2P5-201ENST00000454986 1264 ntBASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 MIR6775-201ENST00000617557 69 ntBASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 AC003102.2-201ENST00000589195 1469 ntBASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 AL009178.2-201ENST00000597278 2719 ntBASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms