Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VRK2Q86Y07 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK2Q86Y07 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VRK2Q86Y07 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK2Q86Y07 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK2Q86Y07 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK2Q86Y07 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK2Q86Y07 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK2Q86Y07 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK2Q86Y07 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK2Q86Y07 AC236430.1-201ENST00000402231 743 ntBASIC13.85□□□□□ -0.19
VRK2Q86Y07 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VRK2Q86Y07 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 FAM207CP-201ENST00000443486 507 ntBASIC13.85□□□□□ -0.19
VRK2Q86Y07 BCRP1-201ENST00000444246 691 ntBASIC13.85□□□□□ -0.19
VRK2Q86Y07 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 GIMAP3P-201ENST00000495150 836 ntBASIC13.85□□□□□ -0.19
VRK2Q86Y07 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 WASH4P-201ENST00000564273 1246 ntBASIC13.85□□□□□ -0.19
VRK2Q86Y07 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 AC004466.1-201ENST00000599515 1080 ntBASIC13.85□□□□□ -0.19
VRK2Q86Y07 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VRK2Q86Y07 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK2Q86Y07 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.85□□□□□ -0.19
VRK2Q86Y07 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VRK2Q86Y07 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VRK2Q86Y07 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 AGGF1P1-201ENST00000509500 2073 ntBASIC13.84□□□□□ -0.19
VRK2Q86Y07 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 SALL4P5-201ENST00000419001 1760 ntBASIC13.84□□□□□ -0.19
VRK2Q86Y07 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 AC002472.2-201ENST00000442739 958 ntBASIC13.84□□□□□ -0.19
VRK2Q86Y07 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 WFDC1-204ENST00000613603 549 ntBASIC13.84□□□□□ -0.19
VRK2Q86Y07 CU634019.7-201ENST00000624153 1185 ntBASIC13.84□□□□□ -0.19
VRK2Q86Y07 FP236241.2-201ENST00000624906 1185 ntBASIC13.84□□□□□ -0.19
VRK2Q86Y07 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms