Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 FAM86MP-201ENST00000340703 885 ntBASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 RPSAP36-202ENST00000494591 1261 ntBASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 ALG3P1-201ENST00000508806 1114 ntBASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 GCOM2-201ENST00000509133 1104 ntBASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 AC018442.1-201ENST00000421439 2061 ntBASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM4Q86VH4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 AC100850.1-201ENST00000506768 649 ntBASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms