Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 HILS1-202ENST00000545329 423 ntBASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 AC004840.1-201ENST00000636359 365 ntBASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 AL353779.1-201ENST00000434793 351 ntBASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 RN7SL752P-201ENST00000463779 287 ntBASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 AC104794.3-201ENST00000566840 1248 ntBASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 AL844908.2-201ENST00000609461 460 ntBASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 AC114271.1-201ENST00000612689 2813 ntBASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
FOXR1Q6PIV2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 SPDYE19P-201ENST00000338590 713 ntBASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXR1Q6PIV2 ARSEP1-201ENST00000420443 635 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms