Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF43Q68DV7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RNF43Q68DV7 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF43Q68DV7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF43Q68DV7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF43Q68DV7 AL158070.2-201ENST00000623713 1621 ntBASIC15.72■□□□□ 0.11
RNF43Q68DV7 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF43Q68DV7 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF43Q68DV7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF43Q68DV7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF43Q68DV7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF43Q68DV7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 AC006001.1-201ENST00000325130 474 ntBASIC15.72■□□□□ 0.11
RNF43Q68DV7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF43Q68DV7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF43Q68DV7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 RPL13AP20-201ENST00000459725 609 ntBASIC15.72■□□□□ 0.11
RNF43Q68DV7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF43Q68DV7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 RN7SL560P-201ENST00000577943 264 ntBASIC15.72■□□□□ 0.11
RNF43Q68DV7 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 AC145423.3-201ENST00000615987 467 ntBASIC15.72■□□□□ 0.11
RNF43Q68DV7 AC009542.2-202ENST00000619004 1067 ntBASIC15.72■□□□□ 0.11
RNF43Q68DV7 AC132938.4-201ENST00000623835 848 ntBASIC15.72■□□□□ 0.11
RNF43Q68DV7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF43Q68DV7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF43Q68DV7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF43Q68DV7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF43Q68DV7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF43Q68DV7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF43Q68DV7 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
RNF43Q68DV7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF43Q68DV7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF43Q68DV7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF43Q68DV7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 AC005252.3-201ENST00000623855 2258 ntBASIC15.71■□□□□ 0.11
RNF43Q68DV7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RNF43Q68DV7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF43Q68DV7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
RNF43Q68DV7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF43Q68DV7 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 AC136759.1-202ENST00000530858 2194 ntBASIC15.71■□□□□ 0.11
RNF43Q68DV7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RNF43Q68DV7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RNF43Q68DV7 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF43Q68DV7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF43Q68DV7 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.71■□□□□ 0.11
RNF43Q68DV7 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.71■□□□□ 0.11
RNF43Q68DV7 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF43Q68DV7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.71■□□□□ 0.11
RNF43Q68DV7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF43Q68DV7 AL118558.3-201ENST00000607414 1079 ntBASIC15.71■□□□□ 0.11
RNF43Q68DV7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF43Q68DV7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RNF43Q68DV7 RHOXF1P1-202ENST00000635473 501 ntBASIC15.71■□□□□ 0.11
RNF43Q68DV7 AL603764.1-201ENST00000636452 321 ntBASIC15.71■□□□□ 0.11
RNF43Q68DV7 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
RNF43Q68DV7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 OR2I1P-210ENST00000642037 4691 ntBASIC15.71■□□□□ 0.11
RNF43Q68DV7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF43Q68DV7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms