Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 AL513523.2-202ENST00000427283 2040 ntBASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 PCDHB19P-201ENST00000570871 2371 ntBASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 AC114947.1-202ENST00000514136 344 ntBASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 AC107464.3-201ENST00000609172 737 ntBASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 AC073911.3-201ENST00000624401 631 ntBASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 AL132780.4-201ENST00000624870 1135 ntBASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD4Q5XG99 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 KRT18P66-201ENST00000452970 1269 ntBASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 DUX4L50-201ENST00000455245 715 ntBASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 FTH1P22-201ENST00000456305 520 ntBASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD4Q5XG99 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 AC087481.3-201ENST00000602886 1894 ntBASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 RN7SL530P-201ENST00000485097 298 ntBASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 MARK2P16-201ENST00000605714 1723 ntBASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms