Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 FTH1P14-201ENST00000482930 551 ntBASIC13.07□□□□□ -0.32
FAM27BQ5VT28 AC022447.6-201ENST00000515522 438 ntBASIC13.07□□□□□ -0.32
FAM27BQ5VT28 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 AC106820.3-201ENST00000561653 397 ntBASIC13.07□□□□□ -0.32
FAM27BQ5VT28 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 AC006453.4-201ENST00000636949 1252 ntBASIC13.07□□□□□ -0.32
FAM27BQ5VT28 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 INE2-201ENST00000630399 1874 ntBASIC13.07□□□□□ -0.32
FAM27BQ5VT28 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 BX640514.1-201ENST00000583223 1918 ntBASIC13.07□□□□□ -0.32
FAM27BQ5VT28 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.07□□□□□ -0.32
FAM27BQ5VT28 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 AC020910.5-201ENST00000623668 1865 ntBASIC13.06□□□□□ -0.32
FAM27BQ5VT28 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 FAM8A4P-201ENST00000435433 1213 ntBASIC13.06□□□□□ -0.32
FAM27BQ5VT28 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 AL391280.1-201ENST00000506969 1062 ntBASIC13.06□□□□□ -0.32
FAM27BQ5VT28 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 ECM1P1-201ENST00000604092 1279 ntBASIC13.06□□□□□ -0.32
FAM27BQ5VT28 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 AC097359.2-201ENST00000604992 2389 ntBASIC13.06□□□□□ -0.32
FAM27BQ5VT28 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
FAM27BQ5VT28 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
FAM27BQ5VT28 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
FAM27BQ5VT28 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.05□□□□□ -0.32
FAM27BQ5VT28 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
FAM27BQ5VT28 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FAM27BQ5VT28 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FAM27BQ5VT28 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
FAM27BQ5VT28 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
FAM27BQ5VT28 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
FAM27BQ5VT28 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
FAM27BQ5VT28 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
FAM27BQ5VT28 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
FAM27BQ5VT28 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
FAM27BQ5VT28 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FAM27BQ5VT28 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.05□□□□□ -0.32
FAM27BQ5VT28 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FAM27BQ5VT28 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FAM27BQ5VT28 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FAM27BQ5VT28 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
FAM27BQ5VT28 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms