Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 PFN2-212ENST00000490975 858 ntTSL 4 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 AL132994.1-201ENST00000554098 400 ntBASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 AC055811.3-201ENST00000584952 686 ntBASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 ST5-261ENST00000626808 1071 ntTSL 5 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 AC007950.2-201ENST00000615045 2347 ntBASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 BAK1P1-201ENST00000317045 636 ntBASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 AC244197.1-201ENST00000456494 951 ntBASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 VENTXP3-201ENST00000546480 773 ntBASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 LINC00554-201ENST00000564841 3011 ntBASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 AP000769.1-203ENST00000637245 208 ntBASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 AC018529.2-202ENST00000611482 3087 ntBASIC9.68□□□□□ -0.86
VPS13DQ5THJ4 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 AC013268.4-201ENST00000637413 2228 ntBASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 HNRNPA1P58-201ENST00000403629 610 ntBASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 AC092573.1-201ENST00000433054 884 ntBASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 PRSS3P1-201ENST00000503996 742 ntBASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 AP005212.2-201ENST00000584979 510 ntBASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 BPIFB5P-201ENST00000457066 1099 ntBASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 MAX-218ENST00000557746 571 ntTSL 4 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 MIR4746-201ENST00000579802 71 ntBASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 AC018695.6-201ENST00000614011 534 ntBASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 AC073592.2-201ENST00000623062 780 ntBASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC9.67□□□□□ -0.86
VPS13DQ5THJ4 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms