Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.83■□□□□ 0.12
VARS2Q5ST30 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.83■□□□□ 0.12
VARS2Q5ST30 AL645939.5-201ENST00000606834 243 ntBASIC15.83■□□□□ 0.12
VARS2Q5ST30 SUGT1P3-205ENST00000633814 572 ntTSL 3 BASIC15.83■□□□□ 0.12
VARS2Q5ST30 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VARS2Q5ST30 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
VARS2Q5ST30 TUBBP5-203ENST00000508529 1334 ntBASIC15.83■□□□□ 0.12
VARS2Q5ST30 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.83■□□□□ 0.12
VARS2Q5ST30 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VARS2Q5ST30 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC15.83■□□□□ 0.12
VARS2Q5ST30 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
VARS2Q5ST30 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
VARS2Q5ST30 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.83■□□□□ 0.12
VARS2Q5ST30 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VARS2Q5ST30 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VARS2Q5ST30 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.83■□□□□ 0.12
VARS2Q5ST30 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.83■□□□□ 0.12
VARS2Q5ST30 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 RPL18P13-201ENST00000478088 569 ntBASIC15.82■□□□□ 0.12
VARS2Q5ST30 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 ALG3P1-201ENST00000508806 1114 ntBASIC15.82■□□□□ 0.12
VARS2Q5ST30 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 AC090515.5-201ENST00000560378 526 ntTSL 5 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 AC068587.8-201ENST00000641239 219 ntBASIC15.82■□□□□ 0.12
VARS2Q5ST30 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VARS2Q5ST30 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.82■□□□□ 0.12
VARS2Q5ST30 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VARS2Q5ST30 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VARS2Q5ST30 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.81■□□□□ 0.12
VARS2Q5ST30 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 MIR769-201ENST00000390225 118 ntBASIC15.81■□□□□ 0.12
VARS2Q5ST30 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.81■□□□□ 0.12
VARS2Q5ST30 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 AC244394.1-201ENST00000435000 1665 ntBASIC15.81■□□□□ 0.12
VARS2Q5ST30 FAM58BP-201ENST00000439056 645 ntBASIC15.81■□□□□ 0.12
VARS2Q5ST30 KLF2P1-201ENST00000447438 1042 ntBASIC15.81■□□□□ 0.12
VARS2Q5ST30 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.81■□□□□ 0.12
VARS2Q5ST30 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.81■□□□□ 0.12
VARS2Q5ST30 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.81■□□□□ 0.12
VARS2Q5ST30 GCOM2-201ENST00000509133 1104 ntBASIC15.81■□□□□ 0.12
VARS2Q5ST30 AC131206.1-201ENST00000538078 1211 ntBASIC15.81■□□□□ 0.12
VARS2Q5ST30 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.81■□□□□ 0.12
VARS2Q5ST30 AC104072.1-201ENST00000568817 668 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms