Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 AC099063.4-201ENST00000641099 1602 ntBASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 AC012441.1-201ENST00000446669 685 ntBASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 AP000812.2-201ENST00000538934 718 ntBASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 C2orf69P2-201ENST00000562032 1123 ntBASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 AL603764.1-201ENST00000636452 321 ntBASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.74■□□□□ 0.27
HERC4Q5GLZ8 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 AC097376.2-205ENST00000610159 5334 ntBASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 LINC00552-201ENST00000625151 2579 ntBASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 AC006033.1-201ENST00000440505 426 ntBASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.73■□□□□ 0.27
HERC4Q5GLZ8 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms