Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 GHSR-202ENST00000427970 912 ntBASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 AC093433.1-201ENST00000458048 571 ntBASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 SAMD11P1-201ENST00000571429 661 ntBASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 REXO1L4P-201ENST00000605109 1937 ntBASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 ST20-AS1-201ENST00000560255 4223 ntBASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
KHDC1Q4VXA5 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 AC027612.1-201ENST00000445234 2395 ntBASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 MTHFR-210ENST00000641407 2387 ntBASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 FLJ16779-201ENST00000612722 7638 ntBASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 ACTG1P3-201ENST00000431775 1114 ntBASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 KRT17P7-201ENST00000451704 1104 ntBASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 AC007389.4-201ENST00000454674 793 ntBASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 USP32P1-208ENST00000506594 1164 ntBASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms