Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
DDR1Q08345 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.21■□□□□ 0.51
DDR1Q08345 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.21■□□□□ 0.51
DDR1Q08345 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDR1Q08345 AC112693.3-201ENST00000624819 1983 ntBASIC18.21■□□□□ 0.51
DDR1Q08345 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDR1Q08345 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.21■□□□□ 0.51
DDR1Q08345 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DDR1Q08345 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC18.21■□□□□ 0.51
DDR1Q08345 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DDR1Q08345 OR8T1P-201ENST00000421347 918 ntBASIC18.21■□□□□ 0.51
DDR1Q08345 ST13P19-201ENST00000442505 1124 ntBASIC18.21■□□□□ 0.51
DDR1Q08345 PPIA-208ENST00000489459 907 ntTSL 2 BASIC18.21■□□□□ 0.51
DDR1Q08345 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC18.21■□□□□ 0.51
DDR1Q08345 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC18.21■□□□□ 0.51
DDR1Q08345 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
DDR1Q08345 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC18.21■□□□□ 0.51
DDR1Q08345 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC18.21■□□□□ 0.51
DDR1Q08345 PPIA-210ENST00000620047 827 ntTSL 5 BASIC18.21■□□□□ 0.51
DDR1Q08345 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.21■□□□□ 0.51
DDR1Q08345 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDR1Q08345 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDR1Q08345 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC18.21■□□□□ 0.51
DDR1Q08345 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DDR1Q08345 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.21■□□□□ 0.51
DDR1Q08345 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
DDR1Q08345 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.21■□□□□ 0.51
DDR1Q08345 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.21■□□□□ 0.5
DDR1Q08345 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.21■□□□□ 0.5
DDR1Q08345 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
DDR1Q08345 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDR1Q08345 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDR1Q08345 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDR1Q08345 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.2■□□□□ 0.5
DDR1Q08345 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
DDR1Q08345 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDR1Q08345 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
DDR1Q08345 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDR1Q08345 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
DDR1Q08345 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC18.2■□□□□ 0.5
DDR1Q08345 DDX39AP1-201ENST00000445147 1181 ntBASIC18.2■□□□□ 0.5
DDR1Q08345 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC18.2■□□□□ 0.5
DDR1Q08345 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDR1Q08345 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC18.2■□□□□ 0.5
DDR1Q08345 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC18.2■□□□□ 0.5
DDR1Q08345 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC18.2■□□□□ 0.5
DDR1Q08345 THY1-209ENST00000580275 578 ntTSL 3 BASIC18.2■□□□□ 0.5
DDR1Q08345 AC140113.1-201ENST00000603467 169 ntBASIC18.2■□□□□ 0.5
DDR1Q08345 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDR1Q08345 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDR1Q08345 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDR1Q08345 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.2■□□□□ 0.5
DDR1Q08345 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDR1Q08345 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDR1Q08345 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDR1Q08345 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC18.2■□□□□ 0.5
DDR1Q08345 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
DDR1Q08345 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.2■□□□□ 0.5
DDR1Q08345 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC18.2■□□□□ 0.5
DDR1Q08345 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDR1Q08345 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDR1Q08345 C18orf15-201ENST00000623680 2534 ntBASIC18.19■□□□□ 0.5
DDR1Q08345 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDR1Q08345 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC18.19■□□□□ 0.5
DDR1Q08345 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDR1Q08345 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDR1Q08345 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDR1Q08345 COX20P1-201ENST00000366529 357 ntBASIC18.19■□□□□ 0.5
DDR1Q08345 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DDR1Q08345 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDR1Q08345 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
DDR1Q08345 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC18.19■□□□□ 0.5
DDR1Q08345 RPL35P9-201ENST00000446059 350 ntBASIC18.19■□□□□ 0.5
DDR1Q08345 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DDR1Q08345 AC093826.1-201ENST00000508655 993 ntBASIC18.19■□□□□ 0.5
DDR1Q08345 FAM86KP-201ENST00000509817 987 ntBASIC18.19■□□□□ 0.5
DDR1Q08345 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC18.19■□□□□ 0.5
DDR1Q08345 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DDR1Q08345 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC18.19■□□□□ 0.5
DDR1Q08345 AC055811.3-201ENST00000584952 686 ntBASIC18.19■□□□□ 0.5
DDR1Q08345 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC18.19■□□□□ 0.5
DDR1Q08345 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
DDR1Q08345 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
DDR1Q08345 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.19■□□□□ 0.5
DDR1Q08345 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.19■□□□□ 0.5
DDR1Q08345 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDR1Q08345 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDR1Q08345 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
DDR1Q08345 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DDR1Q08345 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDR1Q08345 LINC01101-201ENST00000622953 1884 ntBASIC18.18■□□□□ 0.5
DDR1Q08345 AC020658.6-201ENST00000623564 1870 ntBASIC18.18■□□□□ 0.5
DDR1Q08345 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDR1Q08345 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDR1Q08345 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDR1Q08345 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDR1Q08345 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDR1Q08345 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDR1Q08345 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDR1Q08345 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms