Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 AC002472.2-201ENST00000442739 958 ntBASIC14.45□□□□□ -0.1
HMGCS1Q01581 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 AC022616.1-201ENST00000518688 554 ntBASIC14.45□□□□□ -0.1
HMGCS1Q01581 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 AL132655.2-201ENST00000596276 594 ntBASIC14.45□□□□□ -0.1
HMGCS1Q01581 CHCHD2P3-201ENST00000603038 451 ntBASIC14.45□□□□□ -0.1
HMGCS1Q01581 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HMGCS1Q01581 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCS1Q01581 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 AC041040.2-201ENST00000622926 2899 ntBASIC14.44□□□□□ -0.1
HMGCS1Q01581 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.44□□□□□ -0.1
HMGCS1Q01581 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCS1Q01581 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 AGGF1P1-201ENST00000509500 2073 ntBASIC14.43□□□□□ -0.1
HMGCS1Q01581 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms