Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.78□□□□□ -0.04
SRP54P61011 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SRP54P61011 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SRP54P61011 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.78□□□□□ -0.04
SRP54P61011 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
SRP54P61011 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 AC004898.1-201ENST00000451057 766 ntBASIC14.78□□□□□ -0.04
SRP54P61011 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.78□□□□□ -0.04
SRP54P61011 AC100850.1-201ENST00000506768 649 ntBASIC14.78□□□□□ -0.04
SRP54P61011 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.78□□□□□ -0.04
SRP54P61011 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.78□□□□□ -0.04
SRP54P61011 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.78□□□□□ -0.04
SRP54P61011 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.78□□□□□ -0.04
SRP54P61011 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.78□□□□□ -0.04
SRP54P61011 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.78□□□□□ -0.04
SRP54P61011 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.78□□□□□ -0.04
SRP54P61011 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.78□□□□□ -0.04
SRP54P61011 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.78□□□□□ -0.04
SRP54P61011 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.78□□□□□ -0.04
SRP54P61011 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SRP54P61011 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SRP54P61011 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SRP54P61011 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SRP54P61011 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRP54P61011 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SRP54P61011 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP54P61011 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP54P61011 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP54P61011 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.77□□□□□ -0.04
SRP54P61011 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP54P61011 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.77□□□□□ -0.04
SRP54P61011 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP54P61011 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.77□□□□□ -0.04
SRP54P61011 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP54P61011 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.77□□□□□ -0.04
SRP54P61011 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP54P61011 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP54P61011 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SRP54P61011 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SRP54P61011 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.77□□□□□ -0.04
SRP54P61011 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SRP54P61011 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP54P61011 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
SRP54P61011 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SRP54P61011 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP54P61011 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP54P61011 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.77□□□□□ -0.04
SRP54P61011 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SRP54P61011 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
SRP54P61011 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SRP54P61011 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.77□□□□□ -0.05
SRP54P61011 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SRP54P61011 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.77□□□□□ -0.05
SRP54P61011 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.77□□□□□ -0.05
SRP54P61011 MIR4683-201ENST00000579659 81 ntBASIC14.77□□□□□ -0.05
SRP54P61011 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.77□□□□□ -0.05
SRP54P61011 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SRP54P61011 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.77□□□□□ -0.05
SRP54P61011 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.77□□□□□ -0.05
SRP54P61011 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.77□□□□□ -0.05
SRP54P61011 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SRP54P61011 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SRP54P61011 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.77□□□□□ -0.05
SRP54P61011 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SRP54P61011 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SRP54P61011 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SRP54P61011 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.77□□□□□ -0.05
SRP54P61011 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SRP54P61011 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SRP54P61011 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SRP54P61011 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SRP54P61011 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SRP54P61011 MROH4P-201ENST00000431302 1578 ntBASIC14.77□□□□□ -0.05
SRP54P61011 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SRP54P61011 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SRP54P61011 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SRP54P61011 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SRP54P61011 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms