Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.42■□□□□ 0.38
RHBDL3P58872 ST13P19-201ENST00000442505 1124 ntBASIC17.42■□□□□ 0.38
RHBDL3P58872 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.42■□□□□ 0.38
RHBDL3P58872 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.42■□□□□ 0.38
RHBDL3P58872 PGAM1P5-201ENST00000548011 764 ntBASIC17.42■□□□□ 0.38
RHBDL3P58872 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.42■□□□□ 0.38
RHBDL3P58872 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.42■□□□□ 0.38
RHBDL3P58872 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDL3P58872 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RHBDL3P58872 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDL3P58872 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.42■□□□□ 0.38
RHBDL3P58872 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDL3P58872 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.42■□□□□ 0.38
RHBDL3P58872 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RHBDL3P58872 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.42■□□□□ 0.38
RHBDL3P58872 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.42■□□□□ 0.38
RHBDL3P58872 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDL3P58872 AC006480.2-201ENST00000609770 1337 ntBASIC17.42■□□□□ 0.38
RHBDL3P58872 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
RHBDL3P58872 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDL3P58872 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDL3P58872 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDL3P58872 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.42■□□□□ 0.38
RHBDL3P58872 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDL3P58872 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.42■□□□□ 0.38
RHBDL3P58872 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.42■□□□□ 0.38
RHBDL3P58872 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RHBDL3P58872 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.41■□□□□ 0.38
RHBDL3P58872 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RHBDL3P58872 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RHBDL3P58872 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.41■□□□□ 0.38
RHBDL3P58872 AC069218.1-201ENST00000435269 762 ntBASIC17.41■□□□□ 0.38
RHBDL3P58872 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.41■□□□□ 0.38
RHBDL3P58872 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.41■□□□□ 0.38
RHBDL3P58872 RN7SL67P-201ENST00000492147 296 ntBASIC17.41■□□□□ 0.38
RHBDL3P58872 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC17.41■□□□□ 0.38
RHBDL3P58872 MIR3677-201ENST00000578964 60 ntBASIC17.41■□□□□ 0.38
RHBDL3P58872 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.41■□□□□ 0.38
RHBDL3P58872 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.41■□□□□ 0.38
RHBDL3P58872 MIR6769A-201ENST00000617340 73 ntBASIC17.41■□□□□ 0.38
RHBDL3P58872 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.41■□□□□ 0.38
RHBDL3P58872 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC17.41■□□□□ 0.38
RHBDL3P58872 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.41■□□□□ 0.38
RHBDL3P58872 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.41■□□□□ 0.38
RHBDL3P58872 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RHBDL3P58872 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RHBDL3P58872 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.41■□□□□ 0.38
RHBDL3P58872 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.41■□□□□ 0.38
RHBDL3P58872 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.41■□□□□ 0.38
RHBDL3P58872 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.41■□□□□ 0.38
RHBDL3P58872 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDL3P58872 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
RHBDL3P58872 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDL3P58872 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RHBDL3P58872 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.4■□□□□ 0.38
RHBDL3P58872 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RHBDL3P58872 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.4■□□□□ 0.38
RHBDL3P58872 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.4■□□□□ 0.38
RHBDL3P58872 AC015688.4-201ENST00000580780 1647 ntBASIC17.4■□□□□ 0.38
RHBDL3P58872 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDL3P58872 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDL3P58872 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.4■□□□□ 0.38
RHBDL3P58872 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RHBDL3P58872 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDL3P58872 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDL3P58872 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RHBDL3P58872 AC026316.1-201ENST00000398900 414 ntBASIC17.4■□□□□ 0.38
RHBDL3P58872 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.4■□□□□ 0.38
RHBDL3P58872 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.4■□□□□ 0.38
RHBDL3P58872 AC026320.2-201ENST00000434379 478 ntBASIC17.4■□□□□ 0.38
RHBDL3P58872 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDL3P58872 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.4■□□□□ 0.38
RHBDL3P58872 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.4■□□□□ 0.38
RHBDL3P58872 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.4■□□□□ 0.38
RHBDL3P58872 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDL3P58872 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.4■□□□□ 0.38
RHBDL3P58872 AC103691.2-201ENST00000618824 433 ntBASIC17.4■□□□□ 0.38
RHBDL3P58872 AL353726.2-201ENST00000623259 884 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms