Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 LTF-203ENST00000426532 2494 ntTSL 2 BASIC11.13□□□□□ -0.63
CMC4P56277 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC11.13□□□□□ -0.63
CMC4P56277 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
CMC4P56277 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.13□□□□□ -0.63
CMC4P56277 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
CMC4P56277 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC11.13□□□□□ -0.63
CMC4P56277 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC11.13□□□□□ -0.63
CMC4P56277 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
CMC4P56277 AC003102.2-201ENST00000589195 1469 ntBASIC11.12□□□□□ -0.63
CMC4P56277 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC11.12□□□□□ -0.63
CMC4P56277 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CMC4P56277 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
CMC4P56277 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.12□□□□□ -0.63
CMC4P56277 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 MRPL37P1-201ENST00000592451 1337 ntBASIC11.12□□□□□ -0.63
CMC4P56277 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.12□□□□□ -0.63
CMC4P56277 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.12□□□□□ -0.63
CMC4P56277 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC11.12□□□□□ -0.63
CMC4P56277 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC11.12□□□□□ -0.63
CMC4P56277 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC11.12□□□□□ -0.63
CMC4P56277 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC11.12□□□□□ -0.63
CMC4P56277 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 NCK2-206ENST00000522586 490 ntTSL 5 BASIC11.12□□□□□ -0.63
CMC4P56277 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC11.12□□□□□ -0.63
CMC4P56277 HILS1-202ENST00000545329 423 ntBASIC11.12□□□□□ -0.63
CMC4P56277 NOP2-220ENST00000545915 630 ntTSL 2 BASIC11.12□□□□□ -0.63
CMC4P56277 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC11.12□□□□□ -0.63
CMC4P56277 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC11.12□□□□□ -0.63
CMC4P56277 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC11.12□□□□□ -0.63
CMC4P56277 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC11.12□□□□□ -0.63
CMC4P56277 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC11.12□□□□□ -0.63
CMC4P56277 MIR6775-201ENST00000617557 69 ntBASIC11.12□□□□□ -0.63
CMC4P56277 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CMC4P56277 AC002472.3-201ENST00000640124 621 ntBASIC11.12□□□□□ -0.63
CMC4P56277 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CMC4P56277 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.12□□□□□ -0.63
CMC4P56277 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC11.12□□□□□ -0.63
CMC4P56277 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC11.12□□□□□ -0.63
CMC4P56277 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC11.12□□□□□ -0.63
CMC4P56277 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
CMC4P56277 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC11.12□□□□□ -0.63
CMC4P56277 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CMC4P56277 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC11.12□□□□□ -0.63
CMC4P56277 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CMC4P56277 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
CMC4P56277 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC11.12□□□□□ -0.63
CMC4P56277 AC087386.2-201ENST00000623212 4637 ntBASIC11.12□□□□□ -0.63
CMC4P56277 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC11.11□□□□□ -0.63
CMC4P56277 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CMC4P56277 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC11.11□□□□□ -0.63
CMC4P56277 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC11.11□□□□□ -0.63
CMC4P56277 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.11□□□□□ -0.63
CMC4P56277 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CMC4P56277 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC11.11□□□□□ -0.63
CMC4P56277 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC11.11□□□□□ -0.63
CMC4P56277 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 AC023090.2-201ENST00000625182 2110 ntBASIC11.11□□□□□ -0.63
CMC4P56277 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
CMC4P56277 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
CMC4P56277 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms