Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.34□□□□□ -0.27
GFRA1P56159 AC244093.1-201ENST00000610837 814 ntBASIC13.34□□□□□ -0.27
GFRA1P56159 AC022748.3-201ENST00000621828 275 ntBASIC13.34□□□□□ -0.27
GFRA1P56159 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GFRA1P56159 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
GFRA1P56159 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
GFRA1P56159 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.34□□□□□ -0.27
GFRA1P56159 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
GFRA1P56159 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.34□□□□□ -0.27
GFRA1P56159 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
GFRA1P56159 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GFRA1P56159 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GFRA1P56159 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.34□□□□□ -0.27
GFRA1P56159 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
GFRA1P56159 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
GFRA1P56159 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
GFRA1P56159 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
GFRA1P56159 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.33□□□□□ -0.27
GFRA1P56159 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.33□□□□□ -0.27
GFRA1P56159 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
GFRA1P56159 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
GFRA1P56159 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
GFRA1P56159 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
GFRA1P56159 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 CICP12-201ENST00000455801 843 ntBASIC13.33□□□□□ -0.28
GFRA1P56159 TUBB8P8-201ENST00000458717 1058 ntBASIC13.33□□□□□ -0.28
GFRA1P56159 AC021723.1-201ENST00000486306 515 ntBASIC13.33□□□□□ -0.28
GFRA1P56159 AC091804.1-201ENST00000486888 567 ntBASIC13.33□□□□□ -0.28
GFRA1P56159 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.33□□□□□ -0.28
GFRA1P56159 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.33□□□□□ -0.28
GFRA1P56159 AC100827.2-201ENST00000563214 1194 ntBASIC13.33□□□□□ -0.28
GFRA1P56159 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.33□□□□□ -0.28
GFRA1P56159 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.33□□□□□ -0.28
GFRA1P56159 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 AC027601.3-201ENST00000622907 509 ntBASIC13.33□□□□□ -0.28
GFRA1P56159 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.33□□□□□ -0.28
GFRA1P56159 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.33□□□□□ -0.28
GFRA1P56159 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
GFRA1P56159 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.33□□□□□ -0.28
GFRA1P56159 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
GFRA1P56159 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.33□□□□□ -0.28
GFRA1P56159 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GFRA1P56159 AL136172.1-201ENST00000598590 1394 ntBASIC13.32□□□□□ -0.28
GFRA1P56159 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
GFRA1P56159 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.32□□□□□ -0.28
GFRA1P56159 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
GFRA1P56159 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 AC018529.2-202ENST00000611482 3087 ntBASIC13.32□□□□□ -0.28
GFRA1P56159 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.32□□□□□ -0.28
GFRA1P56159 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
GFRA1P56159 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
GFRA1P56159 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GFRA1P56159 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.32□□□□□ -0.28
GFRA1P56159 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.32□□□□□ -0.28
GFRA1P56159 AL035414.1-201ENST00000451327 857 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms