Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.98□□□□□ -0.17
PSMD4P55036 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.98□□□□□ -0.17
PSMD4P55036 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.98□□□□□ -0.17
PSMD4P55036 KRT17P7-201ENST00000451704 1104 ntBASIC13.98□□□□□ -0.17
PSMD4P55036 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.98□□□□□ -0.17
PSMD4P55036 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.98□□□□□ -0.17
PSMD4P55036 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
PSMD4P55036 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.98□□□□□ -0.17
PSMD4P55036 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PSMD4P55036 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PSMD4P55036 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.98□□□□□ -0.17
PSMD4P55036 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PSMD4P55036 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
PSMD4P55036 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PSMD4P55036 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.98□□□□□ -0.17
PSMD4P55036 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.98□□□□□ -0.17
PSMD4P55036 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.98□□□□□ -0.17
PSMD4P55036 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PSMD4P55036 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PSMD4P55036 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.98□□□□□ -0.17
PSMD4P55036 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.97□□□□□ -0.17
PSMD4P55036 AC018665.1-201ENST00000622927 1362 ntBASIC13.97□□□□□ -0.17
PSMD4P55036 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.97□□□□□ -0.17
PSMD4P55036 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.97□□□□□ -0.17
PSMD4P55036 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 AC092053.3-201ENST00000641308 4975 ntBASIC13.97□□□□□ -0.17
PSMD4P55036 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.97□□□□□ -0.17
PSMD4P55036 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
PSMD4P55036 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PSMD4P55036 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 AC055811.4-201ENST00000624039 1754 ntBASIC13.97□□□□□ -0.17
PSMD4P55036 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 AL512384.1-201ENST00000406683 331 ntBASIC13.97□□□□□ -0.17
PSMD4P55036 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
PSMD4P55036 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.97□□□□□ -0.17
PSMD4P55036 COX20P2-201ENST00000452636 358 ntBASIC13.97□□□□□ -0.17
PSMD4P55036 RN7SL837P-201ENST00000463010 287 ntBASIC13.97□□□□□ -0.17
PSMD4P55036 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.97□□□□□ -0.17
PSMD4P55036 MIR5189-201ENST00000577370 114 ntBASIC13.97□□□□□ -0.17
PSMD4P55036 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.97□□□□□ -0.17
PSMD4P55036 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.97□□□□□ -0.17
PSMD4P55036 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.97□□□□□ -0.17
PSMD4P55036 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PSMD4P55036 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PSMD4P55036 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PSMD4P55036 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.97□□□□□ -0.17
PSMD4P55036 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PSMD4P55036 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.97□□□□□ -0.17
PSMD4P55036 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 CICP14-201ENST00000629111 2732 ntBASIC13.97□□□□□ -0.17
PSMD4P55036 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PSMD4P55036 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PSMD4P55036 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PSMD4P55036 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PSMD4P55036 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
PSMD4P55036 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PSMD4P55036 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PSMD4P55036 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
PSMD4P55036 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PSMD4P55036 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
PSMD4P55036 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PSMD4P55036 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PSMD4P55036 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
PSMD4P55036 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PSMD4P55036 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PSMD4P55036 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
PSMD4P55036 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PSMD4P55036 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.96□□□□□ -0.17
PSMD4P55036 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms