Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
BRCA2P51587 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRCA2P51587 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BRCA2P51587 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BRCA2P51587 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
BRCA2P51587 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC16.2■□□□□ 0.18
BRCA2P51587 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
BRCA2P51587 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRCA2P51587 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BRCA2P51587 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRCA2P51587 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRCA2P51587 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRCA2P51587 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BRCA2P51587 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BRCA2P51587 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BRCA2P51587 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.19■□□□□ 0.18
BRCA2P51587 KRT8P2-201ENST00000556193 944 ntBASIC16.19■□□□□ 0.18
BRCA2P51587 AL118522.1-201ENST00000611368 560 ntBASIC16.19■□□□□ 0.18
BRCA2P51587 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
BRCA2P51587 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC16.19■□□□□ 0.18
BRCA2P51587 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRCA2P51587 C18orf15-201ENST00000623680 2534 ntBASIC16.19■□□□□ 0.18
BRCA2P51587 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
BRCA2P51587 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
BRCA2P51587 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRCA2P51587 SNORA57-201ENST00000383870 149 ntBASIC16.19■□□□□ 0.18
BRCA2P51587 AC098657.1-201ENST00000416270 1135 ntBASIC16.19■□□□□ 0.18
BRCA2P51587 FAM197Y6-201ENST00000420524 766 ntBASIC16.19■□□□□ 0.18
BRCA2P51587 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BRCA2P51587 AC006328.1-201ENST00000437571 379 ntBASIC16.19■□□□□ 0.18
BRCA2P51587 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC16.19■□□□□ 0.18
BRCA2P51587 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC16.19■□□□□ 0.18
BRCA2P51587 NAA40-205ENST00000539656 577 ntTSL 4 BASIC16.19■□□□□ 0.18
BRCA2P51587 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC16.19■□□□□ 0.18
BRCA2P51587 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.19■□□□□ 0.18
BRCA2P51587 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BRCA2P51587 AC012508.2-201ENST00000567613 1472 ntBASIC16.19■□□□□ 0.18
BRCA2P51587 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
BRCA2P51587 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRCA2P51587 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRCA2P51587 AGGF1P1-201ENST00000509500 2073 ntBASIC16.19■□□□□ 0.18
BRCA2P51587 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRCA2P51587 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.19■□□□□ 0.18
BRCA2P51587 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BRCA2P51587 AHCYP3-201ENST00000420053 1279 ntBASIC16.19■□□□□ 0.18
BRCA2P51587 RN7SL173P-201ENST00000461853 292 ntBASIC16.19■□□□□ 0.18
BRCA2P51587 RN7SL277P-201ENST00000481521 288 ntBASIC16.19■□□□□ 0.18
BRCA2P51587 RNA5SP406-201ENST00000516106 112 ntBASIC16.19■□□□□ 0.18
BRCA2P51587 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
BRCA2P51587 AC018529.2-202ENST00000611482 3087 ntBASIC16.19■□□□□ 0.18
BRCA2P51587 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.18■□□□□ 0.18
BRCA2P51587 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRCA2P51587 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.18■□□□□ 0.18
BRCA2P51587 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRCA2P51587 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
BRCA2P51587 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.18■□□□□ 0.18
BRCA2P51587 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.18■□□□□ 0.18
BRCA2P51587 AC098934.1-203ENST00000442868 1262 ntBASIC16.18■□□□□ 0.18
BRCA2P51587 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC16.18■□□□□ 0.18
BRCA2P51587 AC068831.5-201ENST00000557387 328 ntBASIC16.18■□□□□ 0.18
BRCA2P51587 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.18■□□□□ 0.18
BRCA2P51587 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.18■□□□□ 0.18
BRCA2P51587 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BRCA2P51587 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRCA2P51587 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC16.18■□□□□ 0.18
BRCA2P51587 AC232323.1-201ENST00000540724 2099 ntBASIC16.18■□□□□ 0.18
BRCA2P51587 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRCA2P51587 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRCA2P51587 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.18■□□□□ 0.18
BRCA2P51587 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.18■□□□□ 0.18
BRCA2P51587 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRCA2P51587 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRCA2P51587 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
BRCA2P51587 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BRCA2P51587 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.18■□□□□ 0.18
BRCA2P51587 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.18■□□□□ 0.18
BRCA2P51587 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BRCA2P51587 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC16.18■□□□□ 0.18
BRCA2P51587 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.18■□□□□ 0.18
BRCA2P51587 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRCA2P51587 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BRCA2P51587 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRCA2P51587 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.18■□□□□ 0.18
BRCA2P51587 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
BRCA2P51587 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.18■□□□□ 0.18
BRCA2P51587 WASH3P-207ENST00000560956 1394 ntBASIC16.18■□□□□ 0.18
BRCA2P51587 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRCA2P51587 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BRCA2P51587 AL121949.3-201ENST00000406684 385 ntBASIC16.17■□□□□ 0.18
BRCA2P51587 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.17■□□□□ 0.18
BRCA2P51587 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
BRCA2P51587 MIR6893-201ENST00000613458 69 ntBASIC16.17■□□□□ 0.18
BRCA2P51587 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC16.17■□□□□ 0.18
BRCA2P51587 BX322534.1-201ENST00000635574 241 ntBASIC16.17■□□□□ 0.18
BRCA2P51587 AC215524.1-201ENST00000635696 241 ntBASIC16.17■□□□□ 0.18
BRCA2P51587 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BRCA2P51587 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BRCA2P51587 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BRCA2P51587 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.17■□□□□ 0.18
BRCA2P51587 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms