Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 AC145423.3-201ENST00000615987 467 ntBASIC13.35□□□□□ -0.27
CSNK1A1P48729 RPSAP52-203ENST00000622976 1023 ntBASIC13.35□□□□□ -0.27
CSNK1A1P48729 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 CU639417.3-201ENST00000624240 1404 ntBASIC13.35□□□□□ -0.27
CSNK1A1P48729 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 MTHFR-210ENST00000641407 2387 ntBASIC13.35□□□□□ -0.27
CSNK1A1P48729 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.35□□□□□ -0.27
CSNK1A1P48729 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSNK1A1P48729 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 AC232323.1-201ENST00000540724 2099 ntBASIC13.34□□□□□ -0.27
CSNK1A1P48729 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 ST20-AS1-201ENST00000560255 4223 ntBASIC13.34□□□□□ -0.27
CSNK1A1P48729 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSNK1A1P48729 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CSNK1A1P48729 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.33□□□□□ -0.27
CSNK1A1P48729 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CSNK1A1P48729 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.33□□□□□ -0.27
CSNK1A1P48729 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.33□□□□□ -0.27
CSNK1A1P48729 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CSNK1A1P48729 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.33□□□□□ -0.27
CSNK1A1P48729 SNX18-202ENST00000343017 3140 ntBASIC13.33□□□□□ -0.27
CSNK1A1P48729 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CSNK1A1P48729 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CSNK1A1P48729 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.33□□□□□ -0.28
CSNK1A1P48729 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms