Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PDE6BP35913 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PDE6BP35913 AL513523.2-202ENST00000427283 2040 ntBASIC18.18■□□□□ 0.5
PDE6BP35913 IL9RP3-201ENST00000442856 1674 ntBASIC18.18■□□□□ 0.5
PDE6BP35913 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 AL162727.3-201ENST00000635661 2787 ntBASIC18.18■□□□□ 0.5
PDE6BP35913 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.18■□□□□ 0.5
PDE6BP35913 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6BP35913 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
PDE6BP35913 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6BP35913 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6BP35913 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6BP35913 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6BP35913 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.17■□□□□ 0.5
PDE6BP35913 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6BP35913 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC18.17■□□□□ 0.5
PDE6BP35913 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6BP35913 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6BP35913 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC18.17■□□□□ 0.5
PDE6BP35913 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC18.17■□□□□ 0.5
PDE6BP35913 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC18.17■□□□□ 0.5
PDE6BP35913 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC18.17■□□□□ 0.5
PDE6BP35913 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC18.17■□□□□ 0.5
PDE6BP35913 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC18.17■□□□□ 0.5
PDE6BP35913 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC18.17■□□□□ 0.5
PDE6BP35913 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC18.17■□□□□ 0.5
PDE6BP35913 AP000322.3-201ENST00000608665 388 ntBASIC18.17■□□□□ 0.5
PDE6BP35913 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
PDE6BP35913 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6BP35913 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC18.17■□□□□ 0.5
PDE6BP35913 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6BP35913 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6BP35913 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.17■□□□□ 0.5
PDE6BP35913 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.17■□□□□ 0.5
PDE6BP35913 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.17■□□□□ 0.5
PDE6BP35913 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6BP35913 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6BP35913 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.17■□□□□ 0.5
PDE6BP35913 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.17■□□□□ 0.5
PDE6BP35913 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6BP35913 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6BP35913 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6BP35913 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6BP35913 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
PDE6BP35913 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.16■□□□□ 0.5
PDE6BP35913 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PDE6BP35913 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PDE6BP35913 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
PDE6BP35913 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.16■□□□□ 0.5
PDE6BP35913 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
PDE6BP35913 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PDE6BP35913 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.16■□□□□ 0.5
PDE6BP35913 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PDE6BP35913 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 KRT17P5-201ENST00000332088 839 ntBASIC18.16■□□□□ 0.5
PDE6BP35913 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC18.16■□□□□ 0.5
PDE6BP35913 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 AREG-202ENST00000502307 956 ntTSL 5 BASIC18.16■□□□□ 0.5
PDE6BP35913 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC18.16■□□□□ 0.5
PDE6BP35913 AC084752.1-201ENST00000509766 622 ntBASIC18.16■□□□□ 0.5
PDE6BP35913 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC18.16■□□□□ 0.5
PDE6BP35913 AC138701.2-201ENST00000553634 226 ntBASIC18.16■□□□□ 0.5
PDE6BP35913 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.16■□□□□ 0.5
PDE6BP35913 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PDE6BP35913 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PDE6BP35913 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PDE6BP35913 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PDE6BP35913 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
PDE6BP35913 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6BP35913 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PDE6BP35913 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.15■□□□□ 0.5
PDE6BP35913 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.15■□□□□ 0.5
PDE6BP35913 AC009093.10-201ENST00000641956 1442 ntBASIC18.15■□□□□ 0.5
PDE6BP35913 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6BP35913 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6BP35913 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms