Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC018665.1-201ENST00000622927 1362 ntBASIC11.05□□□□□ -0.64
CKS2P33552 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.05□□□□□ -0.64
CKS2P33552 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC11.05□□□□□ -0.64
CKS2P33552 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC11.05□□□□□ -0.64
CKS2P33552 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 Z82170.1-201ENST00000625081 3192 ntBASIC11.05□□□□□ -0.64
CKS2P33552 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC11.05□□□□□ -0.64
CKS2P33552 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
CKS2P33552 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
CKS2P33552 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
CKS2P33552 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.05□□□□□ -0.64
CKS2P33552 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.05□□□□□ -0.64
CKS2P33552 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC11.05□□□□□ -0.64
CKS2P33552 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC11.05□□□□□ -0.64
CKS2P33552 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.05□□□□□ -0.64
CKS2P33552 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.05□□□□□ -0.64
CKS2P33552 HNRNPDP1-201ENST00000439535 754 ntBASIC11.05□□□□□ -0.64
CKS2P33552 FAM197Y8-203ENST00000450145 560 ntBASIC11.05□□□□□ -0.64
CKS2P33552 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.05□□□□□ -0.64
CKS2P33552 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC11.05□□□□□ -0.64
CKS2P33552 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.05□□□□□ -0.64
CKS2P33552 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC11.05□□□□□ -0.64
CKS2P33552 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.05□□□□□ -0.64
CKS2P33552 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC11.05□□□□□ -0.64
CKS2P33552 RARRES2P8-201ENST00000566335 367 ntBASIC11.05□□□□□ -0.64
CKS2P33552 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.05□□□□□ -0.64
CKS2P33552 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
CKS2P33552 AC073548.1-201ENST00000624088 1882 ntBASIC11.05□□□□□ -0.64
CKS2P33552 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
CKS2P33552 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 AGGF1P1-201ENST00000509500 2073 ntBASIC11.05□□□□□ -0.64
CKS2P33552 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.05□□□□□ -0.64
CKS2P33552 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
CKS2P33552 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.05□□□□□ -0.64
CKS2P33552 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 AC015909.5-201ENST00000624336 2266 ntBASIC11.05□□□□□ -0.64
CKS2P33552 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC11.05□□□□□ -0.64
CKS2P33552 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC11.05□□□□□ -0.64
CKS2P33552 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.05□□□□□ -0.64
CKS2P33552 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 TCAM1P-207ENST00000485295 1537 ntBASIC11.04□□□□□ -0.64
CKS2P33552 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CKS2P33552 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
CKS2P33552 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
CKS2P33552 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.04□□□□□ -0.64
CKS2P33552 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.04□□□□□ -0.64
CKS2P33552 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.04□□□□□ -0.64
CKS2P33552 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
CKS2P33552 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
CKS2P33552 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC11.04□□□□□ -0.64
CKS2P33552 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
CKS2P33552 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.04□□□□□ -0.64
CKS2P33552 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC11.04□□□□□ -0.64
CKS2P33552 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.04□□□□□ -0.64
CKS2P33552 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.04□□□□□ -0.64
CKS2P33552 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CKS2P33552 AC008267.7-201ENST00000624570 1194 ntBASIC11.04□□□□□ -0.64
CKS2P33552 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC11.04□□□□□ -0.64
CKS2P33552 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
CKS2P33552 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 AC090505.1-201ENST00000430515 1834 ntBASIC11.04□□□□□ -0.64
CKS2P33552 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS2P33552 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.04□□□□□ -0.64
CKS2P33552 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms