Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 WFDC1-204ENST00000613603 549 ntBASIC14.21□□□□□ -0.13
PTPN6P29350 AL035252.4-201ENST00000624174 288 ntBASIC14.21□□□□□ -0.13
PTPN6P29350 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PTPN6P29350 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PTPN6P29350 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PTPN6P29350 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PTPN6P29350 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
PTPN6P29350 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PTPN6P29350 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PTPN6P29350 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PTPN6P29350 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.21□□□□□ -0.14
PTPN6P29350 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PTPN6P29350 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PTPN6P29350 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.21□□□□□ -0.14
PTPN6P29350 AC011474.4-201ENST00000623523 2076 ntBASIC14.21□□□□□ -0.14
PTPN6P29350 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PTPN6P29350 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.21□□□□□ -0.14
PTPN6P29350 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
PTPN6P29350 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.2□□□□□ -0.14
PTPN6P29350 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PTPN6P29350 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.2□□□□□ -0.14
PTPN6P29350 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.2□□□□□ -0.14
PTPN6P29350 AL442647.2-201ENST00000429864 857 ntBASIC14.2□□□□□ -0.14
PTPN6P29350 VDAC1P7-201ENST00000462417 847 ntBASIC14.2□□□□□ -0.14
PTPN6P29350 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.2□□□□□ -0.14
PTPN6P29350 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.2□□□□□ -0.14
PTPN6P29350 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.2□□□□□ -0.14
PTPN6P29350 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
PTPN6P29350 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.2□□□□□ -0.14
PTPN6P29350 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.2□□□□□ -0.14
PTPN6P29350 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.2□□□□□ -0.14
PTPN6P29350 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PTPN6P29350 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.2□□□□□ -0.14
PTPN6P29350 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 AC016397.2-201ENST00000624848 1985 ntBASIC14.2□□□□□ -0.14
PTPN6P29350 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PTPN6P29350 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
PTPN6P29350 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PTPN6P29350 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 AC063926.2-201ENST00000623766 1308 ntBASIC14.19□□□□□ -0.14
PTPN6P29350 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PTPN6P29350 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PTPN6P29350 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.19□□□□□ -0.14
PTPN6P29350 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.19□□□□□ -0.14
PTPN6P29350 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.19□□□□□ -0.14
PTPN6P29350 AL139094.1-201ENST00000405549 1188 ntBASIC14.19□□□□□ -0.14
PTPN6P29350 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
PTPN6P29350 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.19□□□□□ -0.14
PTPN6P29350 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PTPN6P29350 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PTPN6P29350 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.19□□□□□ -0.14
PTPN6P29350 RN7SL752P-201ENST00000463779 287 ntBASIC14.19□□□□□ -0.14
PTPN6P29350 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.19□□□□□ -0.14
PTPN6P29350 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.19□□□□□ -0.14
PTPN6P29350 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.19□□□□□ -0.14
PTPN6P29350 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.19□□□□□ -0.14
PTPN6P29350 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.19□□□□□ -0.14
PTPN6P29350 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.19□□□□□ -0.14
PTPN6P29350 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.19□□□□□ -0.14
PTPN6P29350 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms