Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
XPAP23025 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.11■□□□□ 0.01
XPAP23025 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.11■□□□□ 0.01
XPAP23025 MESTP3-201ENST00000503460 968 ntBASIC15.11■□□□□ 0.01
XPAP23025 AL391280.1-201ENST00000506969 1062 ntBASIC15.11■□□□□ 0.01
XPAP23025 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.11■□□□□ 0.01
XPAP23025 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.11■□□□□ 0.01
XPAP23025 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.11■□□□□ 0.01
XPAP23025 AP006547.1-201ENST00000563435 692 ntBASIC15.11■□□□□ 0.01
XPAP23025 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.11■□□□□ 0.01
XPAP23025 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
XPAP23025 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.11■□□□□ 0.01
XPAP23025 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.11■□□□□ 0.01
XPAP23025 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.11■□□□□ 0.01
XPAP23025 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
XPAP23025 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.11■□□□□ 0.01
XPAP23025 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.11■□□□□ 0.01
XPAP23025 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.11■□□□□ 0.01
XPAP23025 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.11■□□□□ 0.01
XPAP23025 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.11■□□□□ 0.01
XPAP23025 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.11■□□□□ 0.01
XPAP23025 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
XPAP23025 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XPAP23025 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.1■□□□□ 0.01
XPAP23025 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
XPAP23025 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.1■□□□□ 0.01
XPAP23025 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
XPAP23025 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.1■□□□□ 0.01
XPAP23025 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 AC006486.2-201ENST00000624246 2199 ntBASIC15.1■□□□□ 0.01
XPAP23025 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
XPAP23025 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.1■□□□□ 0.01
XPAP23025 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
XPAP23025 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.1■□□□□ 0.01
XPAP23025 RN7SL713P-201ENST00000582127 302 ntBASIC15.1■□□□□ 0.01
XPAP23025 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.1■□□□□ 0.01
XPAP23025 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.1■□□□□ 0.01
XPAP23025 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 REXO1L6P-201ENST00000603433 1515 ntBASIC15.1■□□□□ 0.01
XPAP23025 TUBB1P2-201ENST00000422712 1306 ntBASIC15.1■□□□□ 0.01
XPAP23025 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 TUBB1P1-201ENST00000503144 1300 ntBASIC15.1■□□□□ 0.01
XPAP23025 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 AC023157.3-201ENST00000619086 2088 ntBASIC15.1■□□□□ 0.01
XPAP23025 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
XPAP23025 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.1■□□□□ 0.01
XPAP23025 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.1■□□□□ 0.01
XPAP23025 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
XPAP23025 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XPAP23025 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
XPAP23025 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
XPAP23025 ZBED1P1-201ENST00000502364 1930 ntBASIC15.09■□□□□ 0.01
XPAP23025 AC091951.1-201ENST00000512854 2465 ntBASIC15.09■□□□□ 0.01
XPAP23025 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.09■□□□□ 0.01
XPAP23025 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.09■□□□□ 0.01
XPAP23025 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
XPAP23025 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
XPAP23025 DBET-201ENST00000630918 3363 ntBASIC15.09■□□□□ 0.01
XPAP23025 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
XPAP23025 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
XPAP23025 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
XPAP23025 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
XPAP23025 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
XPAP23025 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms