Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RFX1P22670 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
RFX1P22670 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 AC005912.2-201ENST00000619492 2400 ntBASIC16.3■□□□□ 0.2
RFX1P22670 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RFX1P22670 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.3■□□□□ 0.2
RFX1P22670 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.3■□□□□ 0.2
RFX1P22670 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RFX1P22670 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
RFX1P22670 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RFX1P22670 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.3■□□□□ 0.2
RFX1P22670 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
RFX1P22670 C2orf27AP3-201ENST00000434123 579 ntBASIC16.3■□□□□ 0.2
RFX1P22670 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.3■□□□□ 0.2
RFX1P22670 RPL13AP20-201ENST00000459725 609 ntBASIC16.3■□□□□ 0.2
RFX1P22670 KRT8P13-201ENST00000463294 1010 ntBASIC16.3■□□□□ 0.2
RFX1P22670 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.3■□□□□ 0.2
RFX1P22670 AC022616.1-201ENST00000518688 554 ntBASIC16.3■□□□□ 0.2
RFX1P22670 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.3■□□□□ 0.2
RFX1P22670 AP001889.1-201ENST00000525414 633 ntBASIC16.3■□□□□ 0.2
RFX1P22670 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.3■□□□□ 0.2
RFX1P22670 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.3■□□□□ 0.2
RFX1P22670 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.3■□□□□ 0.2
RFX1P22670 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.3■□□□□ 0.2
RFX1P22670 AL118558.3-201ENST00000607414 1079 ntBASIC16.3■□□□□ 0.2
RFX1P22670 AL022328.3-201ENST00000607943 679 ntBASIC16.3■□□□□ 0.2
RFX1P22670 AL354718.3-201ENST00000616414 581 ntBASIC16.3■□□□□ 0.2
RFX1P22670 CR382287.1-201ENST00000623954 586 ntBASIC16.3■□□□□ 0.2
RFX1P22670 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RFX1P22670 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RFX1P22670 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.3■□□□□ 0.2
RFX1P22670 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RFX1P22670 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
RFX1P22670 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX1P22670 AC023908.3-201ENST00000564211 3047 ntBASIC16.29■□□□□ 0.2
RFX1P22670 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.29■□□□□ 0.2
RFX1P22670 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RFX1P22670 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX1P22670 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX1P22670 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
RFX1P22670 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RFX1P22670 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX1P22670 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RFX1P22670 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX1P22670 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX1P22670 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
RFX1P22670 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX1P22670 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX1P22670 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX1P22670 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX1P22670 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
RFX1P22670 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX1P22670 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.29■□□□□ 0.2
RFX1P22670 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC16.29■□□□□ 0.2
RFX1P22670 FTH1P14-201ENST00000482930 551 ntBASIC16.29■□□□□ 0.2
RFX1P22670 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX1P22670 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.29■□□□□ 0.2
RFX1P22670 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.29■□□□□ 0.2
RFX1P22670 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.29■□□□□ 0.2
RFX1P22670 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.29■□□□□ 0.2
RFX1P22670 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.29■□□□□ 0.2
RFX1P22670 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.29■□□□□ 0.2
RFX1P22670 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RFX1P22670 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX1P22670 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RFX1P22670 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RFX1P22670 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX1P22670 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX1P22670 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX1P22670 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.29■□□□□ 0.2
RFX1P22670 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RFX1P22670 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX1P22670 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms