Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.11■□□□□ 0.01
HLA-DPA1P20036 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 AL138725.1-201ENST00000407347 1314 ntBASIC15.11■□□□□ 0.01
HLA-DPA1P20036 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DPA1P20036 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 AC140479.7-201ENST00000636301 2332 ntBASIC15.1■□□□□ 0.01
HLA-DPA1P20036 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 BCRP2-202ENST00000447763 634 ntBASIC15.1■□□□□ 0.01
HLA-DPA1P20036 BCRP6-201ENST00000510112 632 ntBASIC15.1■□□□□ 0.01
HLA-DPA1P20036 BCRP7-201ENST00000511549 544 ntBASIC15.1■□□□□ 0.01
HLA-DPA1P20036 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 AC138466.3-201ENST00000619983 221 ntBASIC15.1■□□□□ 0.01
HLA-DPA1P20036 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 CLUHP2-201ENST00000426660 1303 ntBASIC15.1■□□□□ 0.01
HLA-DPA1P20036 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.1■□□□□ 0.01
HLA-DPA1P20036 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 AC113367.3-201ENST00000508316 1912 ntBASIC15.09■□□□□ 0.01
HLA-DPA1P20036 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 AC007686.3-201ENST00000619017 3487 ntBASIC15.09■□□□□ 0.01
HLA-DPA1P20036 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.09■□□□□ 0.01
HLA-DPA1P20036 TPM3P8-201ENST00000330554 643 ntBASIC15.09■□□□□ 0.01
HLA-DPA1P20036 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 FTLP10-202ENST00000505798 471 ntBASIC15.09■□□□□ 0.01
HLA-DPA1P20036 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.09■□□□□ 0.01
HLA-DPA1P20036 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms