Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.67□□□□□ -0.22
CD53P19397 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CD53P19397 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CD53P19397 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.67□□□□□ -0.22
CD53P19397 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CD53P19397 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
CD53P19397 HIST3H2BA-201ENST00000436555 524 ntBASIC13.67□□□□□ -0.22
CD53P19397 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.67□□□□□ -0.22
CD53P19397 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.67□□□□□ -0.22
CD53P19397 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.67□□□□□ -0.22
CD53P19397 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CD53P19397 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.67□□□□□ -0.22
CD53P19397 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.67□□□□□ -0.22
CD53P19397 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.67□□□□□ -0.22
CD53P19397 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.67□□□□□ -0.22
CD53P19397 AC233724.13-201ENST00000598383 410 ntBASIC13.67□□□□□ -0.22
CD53P19397 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.67□□□□□ -0.22
CD53P19397 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.67□□□□□ -0.22
CD53P19397 RPSAP52-203ENST00000622976 1023 ntBASIC13.67□□□□□ -0.22
CD53P19397 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
CD53P19397 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CD53P19397 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.67□□□□□ -0.22
CD53P19397 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CD53P19397 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 AC018665.1-201ENST00000622927 1362 ntBASIC13.67□□□□□ -0.22
CD53P19397 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CD53P19397 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.67□□□□□ -0.22
CD53P19397 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD53P19397 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CD53P19397 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.67□□□□□ -0.22
CD53P19397 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.66□□□□□ -0.22
CD53P19397 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
CD53P19397 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.66□□□□□ -0.22
CD53P19397 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CD53P19397 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.66□□□□□ -0.22
CD53P19397 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
CD53P19397 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CD53P19397 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.66□□□□□ -0.22
CD53P19397 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.66□□□□□ -0.22
CD53P19397 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.66□□□□□ -0.22
CD53P19397 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CD53P19397 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.66□□□□□ -0.22
CD53P19397 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.66□□□□□ -0.22
CD53P19397 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.66□□□□□ -0.22
CD53P19397 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.66□□□□□ -0.22
CD53P19397 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.66□□□□□ -0.22
CD53P19397 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.66□□□□□ -0.22
CD53P19397 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.66□□□□□ -0.22
CD53P19397 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
CD53P19397 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CD53P19397 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.66□□□□□ -0.22
CD53P19397 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CD53P19397 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.66□□□□□ -0.22
CD53P19397 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CD53P19397 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.66□□□□□ -0.22
CD53P19397 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CD53P19397 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.66□□□□□ -0.22
CD53P19397 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CD53P19397 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.66□□□□□ -0.22
CD53P19397 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.66□□□□□ -0.22
CD53P19397 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
CD53P19397 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD53P19397 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.65□□□□□ -0.22
CD53P19397 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD53P19397 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms