Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BMP3P12645 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BMP3P12645 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BMP3P12645 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
BMP3P12645 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BMP3P12645 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BMP3P12645 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BMP3P12645 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
BMP3P12645 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
BMP3P12645 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.12■□□□□ 0.33
BMP3P12645 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BMP3P12645 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BMP3P12645 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BMP3P12645 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BMP3P12645 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BMP3P12645 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BMP3P12645 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BMP3P12645 ACTG1P2-201ENST00000415776 1125 ntBASIC17.12■□□□□ 0.33
BMP3P12645 ACTG1P11-201ENST00000425411 1125 ntBASIC17.12■□□□□ 0.33
BMP3P12645 Z97180.1-201ENST00000445173 988 ntBASIC17.12■□□□□ 0.33
BMP3P12645 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BMP3P12645 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BMP3P12645 CHMP4BP1-201ENST00000556017 588 ntBASIC17.12■□□□□ 0.33
BMP3P12645 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BMP3P12645 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.12■□□□□ 0.33
BMP3P12645 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.12■□□□□ 0.33
BMP3P12645 AC084346.2-201ENST00000607097 949 ntBASIC17.12■□□□□ 0.33
BMP3P12645 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.12■□□□□ 0.33
BMP3P12645 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.12■□□□□ 0.33
BMP3P12645 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BMP3P12645 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.12■□□□□ 0.33
BMP3P12645 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BMP3P12645 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BMP3P12645 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.12■□□□□ 0.33
BMP3P12645 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
BMP3P12645 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BMP3P12645 AC008132.1-202ENST00000342005 1389 ntBASIC17.12■□□□□ 0.33
BMP3P12645 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BMP3P12645 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BMP3P12645 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BMP3P12645 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BMP3P12645 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BMP3P12645 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
BMP3P12645 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BMP3P12645 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
BMP3P12645 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
BMP3P12645 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BMP3P12645 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.11■□□□□ 0.33
BMP3P12645 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BMP3P12645 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BMP3P12645 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BMP3P12645 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BMP3P12645 AC126177.1-201ENST00000547829 2218 ntBASIC17.11■□□□□ 0.33
BMP3P12645 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
BMP3P12645 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BMP3P12645 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.11■□□□□ 0.33
BMP3P12645 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.11■□□□□ 0.33
BMP3P12645 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.11■□□□□ 0.33
BMP3P12645 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.11■□□□□ 0.33
BMP3P12645 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.11■□□□□ 0.33
BMP3P12645 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.11■□□□□ 0.33
BMP3P12645 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.11■□□□□ 0.33
BMP3P12645 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.11■□□□□ 0.33
BMP3P12645 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.11■□□□□ 0.33
BMP3P12645 RHOQP1-201ENST00000555758 579 ntBASIC17.11■□□□□ 0.33
BMP3P12645 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.11■□□□□ 0.33
BMP3P12645 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
BMP3P12645 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
BMP3P12645 AC106872.11-201ENST00000605838 421 ntBASIC17.11■□□□□ 0.33
BMP3P12645 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.11■□□□□ 0.33
BMP3P12645 CU633904.3-201ENST00000624042 1029 ntBASIC17.11■□□□□ 0.33
BMP3P12645 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BMP3P12645 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BMP3P12645 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BMP3P12645 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BMP3P12645 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
BMP3P12645 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.11■□□□□ 0.33
BMP3P12645 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.11■□□□□ 0.33
BMP3P12645 TCAF2P1-201ENST00000291129 2421 ntBASIC17.11■□□□□ 0.33
BMP3P12645 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
BMP3P12645 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.11■□□□□ 0.33
BMP3P12645 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
BMP3P12645 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BMP3P12645 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
BMP3P12645 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BMP3P12645 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
BMP3P12645 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
BMP3P12645 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BMP3P12645 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BMP3P12645 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.1■□□□□ 0.33
BMP3P12645 AL157791.1-201ENST00000553667 1699 ntBASIC17.1■□□□□ 0.33
BMP3P12645 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BMP3P12645 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BMP3P12645 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
BMP3P12645 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
BMP3P12645 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
BMP3P12645 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BMP3P12645 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BMP3P12645 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BMP3P12645 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms