Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.88□□□□□ -0.51
CSN3P07498 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.88□□□□□ -0.51
CSN3P07498 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
CSN3P07498 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
CSN3P07498 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CSN3P07498 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.88□□□□□ -0.51
CSN3P07498 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.88□□□□□ -0.51
CSN3P07498 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
CSN3P07498 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 AC098614.1-201ENST00000368528 745 ntBASIC11.88□□□□□ -0.51
CSN3P07498 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 AL133267.1-201ENST00000398220 340 ntBASIC11.88□□□□□ -0.51
CSN3P07498 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC11.88□□□□□ -0.51
CSN3P07498 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC11.88□□□□□ -0.51
CSN3P07498 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 CTBP2P3-201ENST00000585629 1255 ntBASIC11.88□□□□□ -0.51
CSN3P07498 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC11.88□□□□□ -0.51
CSN3P07498 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC11.88□□□□□ -0.51
CSN3P07498 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
CSN3P07498 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11.88□□□□□ -0.51
CSN3P07498 REXO1L1P-201ENST00000379010 6598 ntBASIC11.88□□□□□ -0.51
CSN3P07498 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
CSN3P07498 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CSN3P07498 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
CSN3P07498 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CSN3P07498 PARN-202ENST00000420015 2360 ntTSL 2 BASIC11.87□□□□□ -0.51
CSN3P07498 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CSN3P07498 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CSN3P07498 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CSN3P07498 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CSN3P07498 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CSN3P07498 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CSN3P07498 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CSN3P07498 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
CSN3P07498 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.87□□□□□ -0.51
CSN3P07498 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CSN3P07498 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CSN3P07498 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CSN3P07498 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CSN3P07498 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CSN3P07498 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CSN3P07498 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CSN3P07498 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CSN3P07498 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC11.87□□□□□ -0.51
CSN3P07498 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC11.87□□□□□ -0.51
CSN3P07498 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CSN3P07498 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
CSN3P07498 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CSN3P07498 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CSN3P07498 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CSN3P07498 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC11.87□□□□□ -0.51
CSN3P07498 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CSN3P07498 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.87□□□□□ -0.51
CSN3P07498 METTL26-204ENST00000397665 558 ntTSL 2 BASIC11.87□□□□□ -0.51
CSN3P07498 AP006294.1-201ENST00000415407 339 ntBASIC11.87□□□□□ -0.51
CSN3P07498 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC11.87□□□□□ -0.51
CSN3P07498 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CSN3P07498 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.87□□□□□ -0.51
CSN3P07498 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CSN3P07498 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC11.87□□□□□ -0.51
CSN3P07498 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC11.87□□□□□ -0.51
CSN3P07498 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC11.87□□□□□ -0.51
CSN3P07498 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CSN3P07498 AC092552.1-201ENST00000547243 906 ntBASIC11.87□□□□□ -0.51
CSN3P07498 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC11.87□□□□□ -0.51
CSN3P07498 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC11.87□□□□□ -0.51
CSN3P07498 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC11.87□□□□□ -0.51
CSN3P07498 AC015910.1-201ENST00000579400 975 ntBASIC11.87□□□□□ -0.51
CSN3P07498 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC11.87□□□□□ -0.51
CSN3P07498 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC11.87□□□□□ -0.51
CSN3P07498 AC000095.1-201ENST00000603208 874 ntBASIC11.87□□□□□ -0.51
CSN3P07498 AC012645.4-201ENST00000610691 1061 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms