Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL5A2P05997 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL5A2P05997 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL5A2P05997 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
COL5A2P05997 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL5A2P05997 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL5A2P05997 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.09■□□□□ 0.65
COL5A2P05997 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL5A2P05997 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC19.09■□□□□ 0.65
COL5A2P05997 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL5A2P05997 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL5A2P05997 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL5A2P05997 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
COL5A2P05997 ZNF436-AS1-201ENST00000335648 2547 ntBASIC19.09■□□□□ 0.65
COL5A2P05997 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC19.09■□□□□ 0.65
COL5A2P05997 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL5A2P05997 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL5A2P05997 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
COL5A2P05997 SAT1-201ENST00000379251 801 ntTSL 2 BASIC19.09■□□□□ 0.65
COL5A2P05997 SAT1-202ENST00000379253 909 ntTSL 2 BASIC19.09■□□□□ 0.65
COL5A2P05997 SAT1-203ENST00000379254 868 ntTSL 3 BASIC19.09■□□□□ 0.65
COL5A2P05997 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL5A2P05997 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC19.09■□□□□ 0.65
COL5A2P05997 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC19.09■□□□□ 0.65
COL5A2P05997 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC19.09■□□□□ 0.65
COL5A2P05997 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC19.09■□□□□ 0.65
COL5A2P05997 AC140658.4-201ENST00000561990 352 ntBASIC19.09■□□□□ 0.65
COL5A2P05997 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
COL5A2P05997 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC19.09■□□□□ 0.65
COL5A2P05997 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL5A2P05997 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL5A2P05997 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
COL5A2P05997 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL5A2P05997 SF1-209ENST00000433274 2317 ntTSL 2 BASIC19.08■□□□□ 0.65
COL5A2P05997 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
COL5A2P05997 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL5A2P05997 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
COL5A2P05997 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL5A2P05997 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.08■□□□□ 0.65
COL5A2P05997 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
COL5A2P05997 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL5A2P05997 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL5A2P05997 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL5A2P05997 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL5A2P05997 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.08■□□□□ 0.65
COL5A2P05997 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL5A2P05997 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL5A2P05997 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
COL5A2P05997 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL5A2P05997 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL5A2P05997 PTGER4P2-201ENST00000328411 252 ntBASIC19.08■□□□□ 0.64
COL5A2P05997 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
COL5A2P05997 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC19.08■□□□□ 0.64
COL5A2P05997 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL5A2P05997 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL5A2P05997 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC19.08■□□□□ 0.64
COL5A2P05997 PTGER4P3-201ENST00000458150 252 ntBASIC19.08■□□□□ 0.64
COL5A2P05997 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC19.08■□□□□ 0.64
COL5A2P05997 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL5A2P05997 RBM4-207ENST00000506523 654 ntTSL 3 BASIC19.08■□□□□ 0.64
COL5A2P05997 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC19.08■□□□□ 0.64
COL5A2P05997 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
COL5A2P05997 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC19.08■□□□□ 0.64
COL5A2P05997 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL5A2P05997 CYP4F36P-201ENST00000589193 186 ntBASIC19.08■□□□□ 0.64
COL5A2P05997 AC021016.3-201ENST00000608367 477 ntBASIC19.08■□□□□ 0.64
COL5A2P05997 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
COL5A2P05997 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL5A2P05997 FUCA1P1-201ENST00000374476 1351 ntBASIC19.08■□□□□ 0.64
COL5A2P05997 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
COL5A2P05997 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL5A2P05997 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.07■□□□□ 0.64
COL5A2P05997 AC019109.1-201ENST00000401725 1874 ntBASIC19.07■□□□□ 0.64
COL5A2P05997 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL5A2P05997 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
COL5A2P05997 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
COL5A2P05997 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL5A2P05997 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL5A2P05997 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC19.07■□□□□ 0.64
COL5A2P05997 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC19.07■□□□□ 0.64
COL5A2P05997 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL5A2P05997 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL5A2P05997 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.07■□□□□ 0.64
COL5A2P05997 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL5A2P05997 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL5A2P05997 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL5A2P05997 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
COL5A2P05997 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL5A2P05997 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC19.07■□□□□ 0.64
COL5A2P05997 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC19.07■□□□□ 0.64
COL5A2P05997 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC19.07■□□□□ 0.64
COL5A2P05997 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
COL5A2P05997 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
COL5A2P05997 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL5A2P05997 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL5A2P05997 AC006529.1-201ENST00000459978 637 ntBASIC19.07■□□□□ 0.64
COL5A2P05997 RN7SL767P-201ENST00000493013 295 ntBASIC19.07■□□□□ 0.64
COL5A2P05997 HINT1-205ENST00000508488 703 ntTSL 2 BASIC19.07■□□□□ 0.64
COL5A2P05997 RPS23-207ENST00000511844 530 ntTSL 2 BASIC19.07■□□□□ 0.64
COL5A2P05997 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms