Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.59□□□□□ -0.39
CD74P04233 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.59□□□□□ -0.39
CD74P04233 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
CD74P04233 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CD74P04233 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.59□□□□□ -0.39
CD74P04233 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CD74P04233 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
CD74P04233 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.59□□□□□ -0.39
CD74P04233 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.59□□□□□ -0.39
CD74P04233 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.59□□□□□ -0.39
CD74P04233 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.59□□□□□ -0.39
CD74P04233 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CD74P04233 AL080243.2-201ENST00000418783 582 ntBASIC12.59□□□□□ -0.39
CD74P04233 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.59□□□□□ -0.39
CD74P04233 MTND6P24-201ENST00000440466 518 ntBASIC12.59□□□□□ -0.39
CD74P04233 AL591424.1-201ENST00000442569 1213 ntBASIC12.59□□□□□ -0.39
CD74P04233 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.59□□□□□ -0.39
CD74P04233 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CD74P04233 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.59□□□□□ -0.39
CD74P04233 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.59□□□□□ -0.39
CD74P04233 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.59□□□□□ -0.39
CD74P04233 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.59□□□□□ -0.39
CD74P04233 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.59□□□□□ -0.39
CD74P04233 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.59□□□□□ -0.39
CD74P04233 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CD74P04233 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.59□□□□□ -0.39
CD74P04233 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.59□□□□□ -0.39
CD74P04233 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CD74P04233 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CD74P04233 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.58□□□□□ -0.39
CD74P04233 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CD74P04233 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CD74P04233 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.39
CD74P04233 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CD74P04233 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CD74P04233 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CD74P04233 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CD74P04233 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.58□□□□□ -0.4
CD74P04233 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.58□□□□□ -0.4
CD74P04233 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.58□□□□□ -0.4
CD74P04233 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.58□□□□□ -0.4
CD74P04233 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CD74P04233 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CD74P04233 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.58□□□□□ -0.4
CD74P04233 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.58□□□□□ -0.4
CD74P04233 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.58□□□□□ -0.4
CD74P04233 AL645937.2-201ENST00000396808 931 ntBASIC12.58□□□□□ -0.4
CD74P04233 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.58□□□□□ -0.4
CD74P04233 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.58□□□□□ -0.4
CD74P04233 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.58□□□□□ -0.4
CD74P04233 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.58□□□□□ -0.4
CD74P04233 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.58□□□□□ -0.4
CD74P04233 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.58□□□□□ -0.4
CD74P04233 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
CD74P04233 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 587 ms