Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD4P01730 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.4■□□□□ 0.22
CD4P01730 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD4P01730 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD4P01730 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CD4P01730 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.4■□□□□ 0.22
CD4P01730 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD4P01730 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CD4P01730 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD4P01730 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD4P01730 RPS9P1-201ENST00000419943 583 ntBASIC16.4■□□□□ 0.22
CD4P01730 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD4P01730 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.4■□□□□ 0.22
CD4P01730 RPL7P35-201ENST00000446943 740 ntBASIC16.4■□□□□ 0.22
CD4P01730 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.4■□□□□ 0.22
CD4P01730 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.4■□□□□ 0.22
CD4P01730 ALG3P1-201ENST00000508806 1114 ntBASIC16.4■□□□□ 0.22
CD4P01730 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD4P01730 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.4■□□□□ 0.22
CD4P01730 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.4■□□□□ 0.22
CD4P01730 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD4P01730 MIR3677-201ENST00000578964 60 ntBASIC16.4■□□□□ 0.22
CD4P01730 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.4■□□□□ 0.22
CD4P01730 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.4■□□□□ 0.22
CD4P01730 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.4■□□□□ 0.22
CD4P01730 AL109837.1-201ENST00000603272 613 ntBASIC16.4■□□□□ 0.22
CD4P01730 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.4■□□□□ 0.22
CD4P01730 AL157813.1-201ENST00000612996 587 ntBASIC16.4■□□□□ 0.22
CD4P01730 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD4P01730 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD4P01730 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.4■□□□□ 0.22
CD4P01730 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.4■□□□□ 0.22
CD4P01730 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD4P01730 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD4P01730 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD4P01730 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD4P01730 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD4P01730 AC105917.1-201ENST00000506637 2539 ntBASIC16.4■□□□□ 0.22
CD4P01730 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.4■□□□□ 0.22
CD4P01730 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CD4P01730 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD4P01730 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
CD4P01730 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
CD4P01730 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 CAP2P1-201ENST00000557743 1390 ntBASIC16.39■□□□□ 0.21
CD4P01730 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.39■□□□□ 0.21
CD4P01730 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CD4P01730 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.39■□□□□ 0.21
CD4P01730 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.39■□□□□ 0.21
CD4P01730 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.39■□□□□ 0.21
CD4P01730 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.39■□□□□ 0.21
CD4P01730 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 AC026320.2-201ENST00000434379 478 ntBASIC16.39■□□□□ 0.21
CD4P01730 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.39■□□□□ 0.21
CD4P01730 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.39■□□□□ 0.21
CD4P01730 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 AC130709.1-201ENST00000484779 1212 ntBASIC16.39■□□□□ 0.21
CD4P01730 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.39■□□□□ 0.21
CD4P01730 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.39■□□□□ 0.21
CD4P01730 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.39■□□□□ 0.21
CD4P01730 AP002803.1-201ENST00000528836 498 ntBASIC16.39■□□□□ 0.21
CD4P01730 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.39■□□□□ 0.21
CD4P01730 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CD4P01730 AL031713.1-201ENST00000564813 661 ntBASIC16.39■□□□□ 0.21
CD4P01730 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.39■□□□□ 0.21
CD4P01730 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.39■□□□□ 0.21
CD4P01730 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.39■□□□□ 0.21
CD4P01730 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.39■□□□□ 0.21
CD4P01730 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.39■□□□□ 0.21
CD4P01730 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.39■□□□□ 0.21
CD4P01730 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CD4P01730 AL162727.3-201ENST00000635661 2787 ntBASIC16.39■□□□□ 0.21
CD4P01730 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.39■□□□□ 0.21
CD4P01730 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.39■□□□□ 0.21
CD4P01730 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.39■□□□□ 0.21
CD4P01730 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD4P01730 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.39■□□□□ 0.21
CD4P01730 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD4P01730 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.38■□□□□ 0.21
CD4P01730 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD4P01730 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms