Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
POLR1AO95602 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
POLR1AO95602 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
POLR1AO95602 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC21.16■□□□□ 0.98
POLR1AO95602 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
POLR1AO95602 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
POLR1AO95602 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
POLR1AO95602 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
POLR1AO95602 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR1AO95602 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
POLR1AO95602 HLA-DMA-203ENST00000395305 777 ntBASIC21.15■□□□□ 0.98
POLR1AO95602 AC004522.1-201ENST00000419978 654 ntBASIC21.15■□□□□ 0.98
POLR1AO95602 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
POLR1AO95602 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC21.15■□□□□ 0.98
POLR1AO95602 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC21.15■□□□□ 0.98
POLR1AO95602 AC106047.2-201ENST00000511723 743 ntBASIC21.15■□□□□ 0.98
POLR1AO95602 AC007952.4-201ENST00000573866 637 ntBASIC21.15■□□□□ 0.98
POLR1AO95602 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
POLR1AO95602 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC21.15■□□□□ 0.98
POLR1AO95602 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
POLR1AO95602 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR1AO95602 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR1AO95602 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR1AO95602 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR1AO95602 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC21.15■□□□□ 0.98
POLR1AO95602 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC21.15■□□□□ 0.98
POLR1AO95602 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
POLR1AO95602 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
POLR1AO95602 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC21.15■□□□□ 0.98
POLR1AO95602 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
POLR1AO95602 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC21.15■□□□□ 0.98
POLR1AO95602 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC21.15■□□□□ 0.98
POLR1AO95602 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC21.15■□□□□ 0.98
POLR1AO95602 RNA5SP417-201ENST00000516459 108 ntBASIC21.15■□□□□ 0.98
POLR1AO95602 AP001184.1-201ENST00000637936 376 ntBASIC21.15■□□□□ 0.98
POLR1AO95602 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
POLR1AO95602 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR1AO95602 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
POLR1AO95602 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.98
POLR1AO95602 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC21.14■□□□□ 0.98
POLR1AO95602 AC023824.1-201ENST00000562945 2975 ntBASIC21.14■□□□□ 0.97
POLR1AO95602 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC21.14■□□□□ 0.97
POLR1AO95602 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC21.14■□□□□ 0.97
POLR1AO95602 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
POLR1AO95602 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
POLR1AO95602 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR1AO95602 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR1AO95602 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC21.14■□□□□ 0.97
POLR1AO95602 MIR2392-201ENST00000584881 84 ntBASIC21.14■□□□□ 0.97
POLR1AO95602 AP000322.3-201ENST00000608665 388 ntBASIC21.14■□□□□ 0.97
POLR1AO95602 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
POLR1AO95602 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR1AO95602 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR1AO95602 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
POLR1AO95602 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR1AO95602 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR1AO95602 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC21.14■□□□□ 0.97
POLR1AO95602 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
POLR1AO95602 HLA-DQB1-202ENST00000399079 1501 ntBASIC21.13■□□□□ 0.97
POLR1AO95602 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR1AO95602 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
POLR1AO95602 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC21.13■□□□□ 0.97
POLR1AO95602 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
POLR1AO95602 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
POLR1AO95602 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
POLR1AO95602 GUSBP10-201ENST00000417412 665 ntBASIC21.13■□□□□ 0.97
POLR1AO95602 CICP12-201ENST00000455801 843 ntBASIC21.13■□□□□ 0.97
POLR1AO95602 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC21.13■□□□□ 0.97
POLR1AO95602 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
POLR1AO95602 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC21.13■□□□□ 0.97
POLR1AO95602 AC010976.2-201ENST00000609697 852 ntBASIC21.13■□□□□ 0.97
POLR1AO95602 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
POLR1AO95602 AC009560.1-201ENST00000620208 434 ntBASIC21.13■□□□□ 0.97
POLR1AO95602 AL451007.2-201ENST00000632004 563 ntBASIC21.13■□□□□ 0.97
POLR1AO95602 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR1AO95602 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC21.13■□□□□ 0.97
POLR1AO95602 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR1AO95602 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC21.13■□□□□ 0.97
POLR1AO95602 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR1AO95602 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1AO95602 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC21.12■□□□□ 0.97
POLR1AO95602 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC21.12■□□□□ 0.97
POLR1AO95602 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC21.12■□□□□ 0.97
POLR1AO95602 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
POLR1AO95602 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
POLR1AO95602 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC21.12■□□□□ 0.97
POLR1AO95602 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC21.12■□□□□ 0.97
POLR1AO95602 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC21.12■□□□□ 0.97
POLR1AO95602 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC21.12■□□□□ 0.97
POLR1AO95602 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
POLR1AO95602 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC21.12■□□□□ 0.97
POLR1AO95602 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC21.12■□□□□ 0.97
POLR1AO95602 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC21.12■□□□□ 0.97
POLR1AO95602 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1AO95602 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1AO95602 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC21.12■□□□□ 0.97
POLR1AO95602 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1AO95602 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1AO95602 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1AO95602 AC099063.4-201ENST00000641099 1602 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms