Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC3O60481 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC3O60481 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC3O60481 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
ZIC3O60481 CICP24-201ENST00000605464 2705 ntBASIC13.4□□□□□ -0.27
ZIC3O60481 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC3O60481 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC3O60481 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.39□□□□□ -0.27
ZIC3O60481 E2F3P2-201ENST00000447755 1422 ntBASIC13.39□□□□□ -0.27
ZIC3O60481 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ZIC3O60481 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC3O60481 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.39□□□□□ -0.27
ZIC3O60481 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC3O60481 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.39□□□□□ -0.27
ZIC3O60481 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC3O60481 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC3O60481 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC3O60481 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
ZIC3O60481 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC3O60481 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC3O60481 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.39□□□□□ -0.27
ZIC3O60481 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.39□□□□□ -0.27
ZIC3O60481 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.39□□□□□ -0.27
ZIC3O60481 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC3O60481 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.39□□□□□ -0.27
ZIC3O60481 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.39□□□□□ -0.27
ZIC3O60481 AC104306.2-201ENST00000451877 341 ntBASIC13.39□□□□□ -0.27
ZIC3O60481 CICP12-201ENST00000455801 843 ntBASIC13.39□□□□□ -0.27
ZIC3O60481 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.39□□□□□ -0.27
ZIC3O60481 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.39□□□□□ -0.27
ZIC3O60481 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.39□□□□□ -0.27
ZIC3O60481 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC3O60481 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ZIC3O60481 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.39□□□□□ -0.27
ZIC3O60481 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC3O60481 AC027601.3-201ENST00000622907 509 ntBASIC13.39□□□□□ -0.27
ZIC3O60481 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.39□□□□□ -0.27
ZIC3O60481 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.39□□□□□ -0.27
ZIC3O60481 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.39□□□□□ -0.27
ZIC3O60481 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ZIC3O60481 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.39□□□□□ -0.27
ZIC3O60481 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
ZIC3O60481 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ZIC3O60481 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ZIC3O60481 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC3O60481 AC018735.1-201ENST00000437208 1502 ntBASIC13.39□□□□□ -0.27
ZIC3O60481 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC3O60481 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.38□□□□□ -0.27
ZIC3O60481 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 AC067930.6-201ENST00000623257 4947 ntBASIC13.38□□□□□ -0.27
ZIC3O60481 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.38□□□□□ -0.27
ZIC3O60481 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.38□□□□□ -0.27
ZIC3O60481 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.38□□□□□ -0.27
ZIC3O60481 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.38□□□□□ -0.27
ZIC3O60481 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.38□□□□□ -0.27
ZIC3O60481 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.38□□□□□ -0.27
ZIC3O60481 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.38□□□□□ -0.27
ZIC3O60481 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.38□□□□□ -0.27
ZIC3O60481 POM121L10P-201ENST00000436994 1285 ntBASIC13.38□□□□□ -0.27
ZIC3O60481 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.38□□□□□ -0.27
ZIC3O60481 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.38□□□□□ -0.27
ZIC3O60481 AC005730.2-201ENST00000564549 1184 ntBASIC13.38□□□□□ -0.27
ZIC3O60481 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.38□□□□□ -0.27
ZIC3O60481 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.38□□□□□ -0.27
ZIC3O60481 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.38□□□□□ -0.27
ZIC3O60481 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.38□□□□□ -0.27
ZIC3O60481 AL118558.3-201ENST00000607414 1079 ntBASIC13.38□□□□□ -0.27
ZIC3O60481 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
ZIC3O60481 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.38□□□□□ -0.27
ZIC3O60481 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.38□□□□□ -0.27
ZIC3O60481 AL162426.1-201ENST00000624141 743 ntBASIC13.38□□□□□ -0.27
ZIC3O60481 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.38□□□□□ -0.27
ZIC3O60481 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ZIC3O60481 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.38□□□□□ -0.27
ZIC3O60481 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.38□□□□□ -0.27
ZIC3O60481 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.38□□□□□ -0.27
ZIC3O60481 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
ZIC3O60481 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.38□□□□□ -0.27
ZIC3O60481 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.38□□□□□ -0.27
ZIC3O60481 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ZIC3O60481 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ZIC3O60481 AC023824.1-201ENST00000562945 2975 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms