Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN1O15353 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXN1O15353 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN1O15353 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN1O15353 CICP24-201ENST00000605464 2705 ntBASIC17.79■□□□□ 0.44
FOXN1O15353 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN1O15353 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXN1O15353 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
FOXN1O15353 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXN1O15353 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN1O15353 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN1O15353 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXN1O15353 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXN1O15353 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN1O15353 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
FOXN1O15353 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
FOXN1O15353 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 AL513477.1-201ENST00000602865 2407 ntBASIC17.78■□□□□ 0.44
FOXN1O15353 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXN1O15353 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 OR2K2-202ENST00000374428 1038 ntBASIC17.78■□□□□ 0.44
FOXN1O15353 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC17.78■□□□□ 0.44
FOXN1O15353 AP003171.2-201ENST00000528208 925 ntBASIC17.78■□□□□ 0.44
FOXN1O15353 AL160314.3-201ENST00000556041 767 ntBASIC17.78■□□□□ 0.44
FOXN1O15353 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXN1O15353 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXN1O15353 AC090164.2-201ENST00000611487 516 ntBASIC17.78■□□□□ 0.44
FOXN1O15353 NAP1L6-202ENST00000641404 1222 ntBASIC17.78■□□□□ 0.44
FOXN1O15353 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
FOXN1O15353 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
FOXN1O15353 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXN1O15353 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXN1O15353 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN1O15353 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
FOXN1O15353 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXN1O15353 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN1O15353 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN1O15353 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN1O15353 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN1O15353 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN1O15353 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
FOXN1O15353 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXN1O15353 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN1O15353 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXN1O15353 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXN1O15353 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN1O15353 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXN1O15353 IGHEP1-201ENST00000521393 651 ntBASIC17.77■□□□□ 0.44
FOXN1O15353 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXN1O15353 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.77■□□□□ 0.44
FOXN1O15353 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
FOXN1O15353 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
FOXN1O15353 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
FOXN1O15353 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
FOXN1O15353 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
FOXN1O15353 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
FOXN1O15353 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
FOXN1O15353 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN1O15353 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN1O15353 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN1O15353 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXN1O15353 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXN1O15353 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
FOXN1O15353 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXN1O15353 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXN1O15353 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
FOXN1O15353 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXN1O15353 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXN1O15353 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.77■□□□□ 0.43
FOXN1O15353 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXN1O15353 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
FOXN1O15353 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.77■□□□□ 0.43
FOXN1O15353 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
FOXN1O15353 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
FOXN1O15353 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
FOXN1O15353 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
FOXN1O15353 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN1O15353 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXN1O15353 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms